RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 SLC25A18Q9H1K4 315 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 GEMIN8Q9NWZ8 242 aaKnown RBP19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 SEPT3Q9UH03 358 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 DGKBQ9Y6T7 804 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 RNF215Q9Y6U7 377 aa19.24■□□□□ 0.67
TRAPPC3-204ENST00000373166 ETV5P41161 510 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 CYP4F2P78329 520 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 ARHGEF7Q14155 803 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 MESDQ14696 234 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 ZFYVE27Q5T4F4 411 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 CFAP58Q5T655 872 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 PHF19Q5T6S3 580 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 OGFOD3Q6PK18 319 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 ARHGAP36Q6ZRI8 547 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 SPRED1Q7Z699 444 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 TAF8Q7Z7C8 310 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 ATPAF2Q8N5M1 289 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 TC2NQ8N9U0 490 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 FAM46DQ8NEK8 389 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 SLC35G2Q8TBE7 412 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 B3GNT4Q9C0J1 378 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 FOXJ2Q9P0K8 574 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 AKAP7Q9P0M2 348 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 LRIT1Q9P2V4 623 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 INTUQ9ULD6 942 aa19.23■□□□□ 0.67
TRAPPC3-204ENST00000373166 C9orf172C9J069 976 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 MTM1Q13496 603 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 AGERQ15109 404 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 PDK2Q15119 407 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 UGP2Q16851 508 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 C14orf28Q4W4Y0 310 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 TMCO4Q5TGY1 634 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 ERAP2Q6P179 960 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 CPNE8Q86YQ8 564 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 MAP7D3Q8IWC1 876 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 KCTD6Q8NC69 237 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 FAM71BQ8TC56 605 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 PDXPQ96GD0 296 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 ZNF599Q96NL3 588 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 TUBGCP5Q96RT8 1024 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 ZNF670Q9BS34 389 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 PCDH12Q9NPG4 1184 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 ETNK2Q9NVF9 386 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 AHCTF1Q8WYP5 2266 aa19.22■□□□□ 0.67
TRAPPC3-204ENST00000373166 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 INSIG1O15503 277 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 MTA2O94776 668 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 PIGNO95427 931 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 PCCBP05166 539 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 CD48P09326 243 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 WT1P19544 449 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 ARHGAP25P42331 645 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 CSNK1DP48730 415 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 LIG3P49916 1009 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 RENBPP51606 427 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 TAS2R40P59535 323 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 TLE1Q04724 770 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 PTPN13Q12923 2485 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 DPYSL3Q14195 570 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 ZNF235Q14590 738 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 NYAP1Q6ZVC0 841 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 SLITRK4Q8IW52 837 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 TP53INP2Q8IXH6 220 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 BBS5Q8N3I7 341 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 TSEN2Q8NCE0 465 aaKnown RBP19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 OR56A4Q8NGH8 313 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 NSMCE1Q8WV22 266 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 HTR3CQ8WXA8 447 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 DPEP2Q9H4A9 486 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 SUV39H2Q9H5I1 410 aa19.21■□□□□ 0.67
TRAPPC3-204ENST00000373166 TLN1Q9Y490 2541 aaKnown RBP19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 B4DGG1 531 aa19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 CACNB4O00305 520 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 NUDT21O43809 227 aaKnown RBP19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 KELP23276 732 aa19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 SERPINA4P29622 427 aa19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 ARSEP51690 589 aa19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 MMRN1Q13201 1228 aa19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 HLTFQ14527 1009 aaKnown RBP eCLIP19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 LBRQ14739 615 aaKnown RBP19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 CLCA4Q14CN2 919 aa19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 MAP9Q49MG5 647 aa19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 ATP13A4Q4VNC1 1196 aa19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 SRLQ86TD4 932 aa19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 PIM3Q86V86 326 aa19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 OR1E3Q8WZA6 343 aa19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 ZNF641Q96N77 438 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 ADNPQ9H2P0 1102 aa19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 SEMA6CQ9H3T2 930 aa19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 ATP13A3Q9H7F0 1226 aa19.2■□□□□ 0.66
TRAPPC3-204ENST00000373166 TSPAN11A1L157 253 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 TMEM202A6NGA9 273 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 STMND1H3BQB6 276 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 CYLC1P35663 651 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 HSPA9P38646 679 aaKnown RBP19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 RGRP47804 291 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 KIAA1024LP59773 190 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 AP1S1P61966 158 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 SPA17Q15506 151 aa19.19■□□□□ 0.66
TRAPPC3-204ENST00000373166 KCTD16Q68DU8 428 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms