RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 PDAP1Q13442 181 aaKnown RBP18.72■□□□□ 0.59
USP49-202ENST00000373010 TYSND1Q2T9J0 566 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 PIGGQ5H8A4 983 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 RNF219Q5W0B1 726 aaPredicted RBP18.72■□□□□ 0.59
USP49-202ENST00000373010 LINGO4Q6UY18 593 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 PGAM4Q8N0Y7 254 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 PTGR2Q8N8N7 351 aaPredicted RBP18.72■□□□□ 0.59
USP49-202ENST00000373010 PLD4Q96BZ4 506 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 TMA16Q96EY4 203 aaKnown RBP18.72■□□□□ 0.59
USP49-202ENST00000373010 SERPINI1Q99574 410 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 UNC93B1Q9H1C4 597 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 TRPM5Q9NZQ8 1165 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 RIMKLBQ9ULI2 386 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 ILVBLA1L0T0 632 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 A6NHS1 94 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 PPP6CO00743 305 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 SUOXP51687 545 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 ATN1P54259 1190 aaPredicted RBP18.71■□□□□ 0.59
USP49-202ENST00000373010 HERVK_113P63132 956 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 TMEM154Q6P9G4 183 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 CYHR1Q6ZMK1 362 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 OVCA2Q8WZ82 227 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 ERVK-6Q9BXR3 956 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 TDRD1Q9BXT4 1180 aaKnown RBP18.71■□□□□ 0.59
USP49-202ENST00000373010 CWH43Q9H720 699 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 SMPD4Q9NXE4 827 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 CORO1CQ9ULV4 474 aaPredicted RBP18.71■□□□□ 0.59
USP49-202ENST00000373010 FAM50BQ9Y247 325 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 BACE2Q9Y5Z0 518 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 A0A0U1RQS6 177 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 ATP6AP2A0A1C7CYW4 349 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 UBDO15205 165 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 ATP6AP2O75787 350 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 HDCP19113 662 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 MRPS35P82673 323 aaKnown RBP18.71■□□□□ 0.59
USP49-202ENST00000373010 GALNT1Q10472 559 aaPredicted RBP18.71■□□□□ 0.59
USP49-202ENST00000373010 KLHDC10Q6PID8 442 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 IGSF21Q96ID5 467 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 MUC3BQ9H195 1237 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 TRPC7Q9HCX4 862 aa18.71■□□□□ 0.59
USP49-202ENST00000373010 AFF4Q9UHB7 1163 aaKnown RBP18.71■□□□□ 0.59
USP49-202ENST00000373010 SNAP91O60641 907 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 RHOBTB1O94844 696 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 PEX2P28328 305 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 NFKB2Q00653 900 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 PFKFB4Q16877 469 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 SETMARQ53H47 684 aaPredicted RBP18.7■□□□□ 0.58
USP49-202ENST00000373010 ADGRF1Q5T601 910 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 CXorf57Q6NSI4 855 aaKnown RBP18.7■□□□□ 0.58
USP49-202ENST00000373010 PAQR3Q6TCH7 311 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 TRMOQ9BU70 441 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 HIPK3Q9H422 1215 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 IKZF3Q9UKT9 509 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 FNDC3AQ9Y2H6 1198 aaKnown RBP18.7■□□□□ 0.58
USP49-202ENST00000373010 MED16Q9Y2X0 877 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 RAI2Q9Y5P3 530 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 A0A1B0GVM2 712 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 DPPA5A6NC42 116 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 GNRH1P01148 92 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 F11P03951 625 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 MTHFD2P13995 350 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 ATXN3P54252 364 aaPredicted RBP18.7■□□□□ 0.58
USP49-202ENST00000373010 INHBCP55103 352 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 SH3BP2P78314 561 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 MS4A2Q01362 244 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 TAF1AQ15573 450 aaPredicted RBP18.7■□□□□ 0.58
USP49-202ENST00000373010 TAF12Q16514 161 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 AGKQ53H12 422 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 REM2Q8IYK8 340 aaPredicted RBP18.7■□□□□ 0.58
USP49-202ENST00000373010 EFHBQ8N7U6 833 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 GDPD5Q8WTR4 605 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 LPGAT1Q92604 370 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 C3orf30Q96M34 536 aa18.7■□□□□ 0.58
USP49-202ENST00000373010 NSUN5Q96P11 429 aaKnown RBP18.7■□□□□ 0.58
USP49-202ENST00000373010 KLF16Q9BXK1 252 aaPredicted RBP18.7■□□□□ 0.58
USP49-202ENST00000373010 MICAL3Q7RTP6 2002 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 ANAPC1Q9H1A4 1944 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 GBF1Q92538 1859 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 GPC4O75487 556 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 CD160O95971 181 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 PENKP01210 267 aaPredicted RBP18.69■□□□□ 0.58
USP49-202ENST00000373010 HSPA1AP0DMV8 641 aaKnown RBP18.69■□□□□ 0.58
USP49-202ENST00000373010 HSPA1BP0DMV9 641 aaKnown RBP18.69■□□□□ 0.58
USP49-202ENST00000373010 HOXB8P17481 243 aaPredicted RBP18.69■□□□□ 0.58
USP49-202ENST00000373010 ARF5P84085 180 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 FASTKQ14296 549 aaKnown RBP18.69■□□□□ 0.58
USP49-202ENST00000373010 SQLEQ14534 574 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 SFT2D3Q587I9 215 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 AFTPHQ6ULP2 937 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 CHST9Q7L1S5 443 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 RNF168Q8IYW5 571 aaPredicted RBP18.69■□□□□ 0.58
USP49-202ENST00000373010 ZNF461Q8TAF7 563 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 ATOH8Q96SQ7 321 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 RETREG1Q9H6L5 497 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 POPDC3Q9HBV1 291 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 FBRSL1Q9HCM7 1045 aaKnown RBP18.69■□□□□ 0.58
USP49-202ENST00000373010 BPIFA1Q9NP55 256 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 INTS10Q9NVR2 710 aaKnown RBP18.69■□□□□ 0.58
USP49-202ENST00000373010 CCDC167Q9P0B6 97 aa18.69■□□□□ 0.58
USP49-202ENST00000373010 GALPQ9UBC7 116 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms