RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 RTL3Q8N8U3 475 aaKnown RBP8.87□□□□□ -0.99
TPM3-213ENST00000368545 ZBTB34Q8NCN2 500 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 P2RY11Q96G91 374 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 LGMNQ99538 433 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 ZYG11BQ9C0D3 744 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 CATSPERZQ9NTU4 200 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 XPO7Q9UIA9 1087 aaKnown RBP8.87□□□□□ -0.99
TPM3-213ENST00000368545 SNX10Q9Y5X0 201 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 NUP205Q92621 2012 aa8.87□□□□□ -0.99
TPM3-213ENST00000368545 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 E7ESA3 106 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 RNF103O00237 685 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 GSTA4O15217 222 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 CXCL14O95715 111 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 TBX18O95935 607 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 OAS1P00973 400 aaKnown RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 MAGEA4P43358 317 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 HARS2P49590 506 aaKnown RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 PFKPQ01813 784 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 ANKRD20A2Q5SQ80 823 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 ANKRD20A1Q5TYW2 823 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 ANKRD20A3Q5VUR7 823 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 MBLAC2Q68D91 279 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 TIGD7Q6NT04 549 aaPredicted RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 B4GALNT4Q76KP1 1039 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 RTL10Q7L3V2 364 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 CCDC110Q8TBZ0 833 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 ELF4Q99607 663 aaPredicted RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 TCF25Q9BQ70 676 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 TMEM109Q9BVC6 243 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 ROPN1BQ9BZX4 212 aaPredicted RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 RNF38Q9H0F5 515 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 ROPN1Q9HAT0 212 aaPredicted RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 SAYSD1Q9NPB0 183 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 ENTPD7Q9NQZ7 604 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 PRMT8Q9NR22 394 aaPredicted RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 EIF2B3Q9NR50 452 aaKnown RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 GPATCH2Q9NW75 528 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 SPO11Q9Y5K1 396 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 NYNRINQ9P2P1 1898 aaKnown RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 FAM208BQ5VWN6 2430 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 MYO18AQ92614 2054 aaKnown RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 SRRM3A6NNA2 597 aaPredicted RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 E7EVH7 732 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 COCHO43405 550 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 TMEM63AO94886 807 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 LRG1P02750 347 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 IVLP07476 585 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 TSHRP16473 764 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 CCNCP24863 283 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 GRK3P35626 688 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 SLC11A2P49281 568 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 PPM1FP49593 454 aaPredicted RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 NDST2P52849 883 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 PHC1P78364 1004 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 SARNPP82979 210 aaKnown RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 SEMA5AQ13591 1074 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 LONRF1Q17RB8 773 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 KRT71Q3SY84 523 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 ANKRD22Q5VYY1 191 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 ITPRIPL1Q6GPH6 555 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 DNAJB7Q7Z6W7 309 aaPredicted RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 NLRP14Q86W24 1093 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 CCDC13Q8IYE1 715 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 ZNF683Q8IZ20 524 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 ELMOD1Q8N336 334 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 ATPAF2Q8N5M1 289 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 MCUQ8NE86 351 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 AZIN2Q96A70 460 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 TSGA13Q96PP4 275 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 SEMA6CQ9H3T2 930 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 ARHGEF3Q9NR81 526 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 DNAJC17Q9NVM6 304 aaKnown RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 TMEM248Q9NWD8 314 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 SPATA6Q9NWH7 488 aaPredicted RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 NINJ2Q9NZG7 142 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 FBXL7Q9UJT9 491 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 FBXO9Q9UK97 447 aaPredicted RBP8.86□□□□□ -0.99
TPM3-213ENST00000368545 VANGL2Q9ULK5 521 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 NEUROG3Q9Y4Z2 214 aa8.86□□□□□ -0.99
TPM3-213ENST00000368545 HELZP42694 1942 aaKnown RBP8.85□□□□□ -0.99
TPM3-213ENST00000368545 FAM47E-STBD1D6RA91 191 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 F5H5T6 163 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 DVL2O14641 736 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 ALOX15BO15296 676 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 ACSL3O95573 720 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 LATS1O95835 1130 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 GLUD1P00367 558 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 APRTP07741 180 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 DNAJB1P25685 340 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 PHBP35232 272 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 MAPKAPK2P49137 400 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 CBX1P83916 185 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 PDIA2Q13087 525 aaKnown RBP8.85□□□□□ -0.99
TPM3-213ENST00000368545 PARP6Q2NL67 630 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 ARTNQ5T4W7 220 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 AGBL2Q5U5Z8 902 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 AFMIDQ63HM1 303 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 FSTL4Q6MZW2 842 aa8.85□□□□□ -0.99
TPM3-213ENST00000368545 LILRA6Q6PI73 481 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms