RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 GCNT6Q5T4J0 391 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 TCEAL6Q6IPX3 200 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 PPTC7Q8NI37 304 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 CORO1BQ9BR76 489 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.68□□□□□ -0.86
CUX1-203ENST00000360264 ARHGEF33A8MVX0 844 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 UBA1P22314 1058 aaKnown RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 VARSP26640 1264 aaKnown RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 CMPK1P30085 196 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 BUD31P41223 144 aaPredicted RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 PFKPQ01813 784 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 SLC20A2Q08357 652 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 TNFAIP8L3Q5GJ75 292 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 NT5DC1Q5TFE4 455 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 RCOR3Q9P2K3 495 aaPredicted RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 USP20Q9Y2K6 914 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 AK5Q9Y6K8 562 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 ATXN2Q99700 1313 aaKnown RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 UGT2B17O75795 530 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 NFATC1O95644 943 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 PRNPP04156 253 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 NDUFV1P49821 464 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 PSMD5Q16401 504 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 HKDC1Q2TB90 917 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 CRELD2Q6UXH1 353 aaPredicted RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 ANKRD52Q8NB46 1076 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 GPR156Q8NFN8 814 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 PCDHGB5Q9Y5G0 923 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 FAM25EA8MYX2 175 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 PTPN9P43378 593 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 BLKP51451 505 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 FAAP100Q0VG06 881 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 GALNT7Q86SF2 657 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 FAM98AQ8NCA5 519 aaKnown RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 DCAKDQ8WVC6 231 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 MYO19Q96H55 970 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 CORO1CQ9ULV4 474 aaPredicted RBP9.68□□□□□ -0.86
CUX1-203ENST00000360264 CYB5AP00167 134 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 RPS6KA3P51812 740 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 RTP1P59025 263 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 C17orf64Q86WR6 236 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 CKAP2Q8WWK9 683 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 MIOSQ9NXC5 875 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 ZNF208O43345 1280 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 KDELR1P24390 212 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 MAP2K5Q13163 448 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 TBC1D21Q8IYX1 336 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 GPER1Q99527 375 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 RNPEPL1Q9HAU8 725 aa9.68□□□□□ -0.86
CUX1-203ENST00000360264 SYN3O14994 580 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 CSDE1O75534 798 aaKnown RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 MRPS22P82650 360 aaKnown RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 RGS21Q2M5E4 152 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 SLC9A9Q8IVB4 645 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 L1RE1Q9UN81 338 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 FKTNO75072 461 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 PIGNO95427 931 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 CYP17A1P05093 508 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 S100A6P06703 90 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 ATAT1Q5SQI0 421 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 AGO1Q9UL18 857 aaKnown RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 IQGAP1P46940 1657 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 AREL1O15033 823 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 IDSP22304 550 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 SLC26A3P40879 764 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 NOGQ13253 232 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 MTFMTQ96DP5 389 aaKnown RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 MRIQ9BWK5 157 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 DHRS7Q9Y394 339 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 NRXN1Q9ULB1 1477 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 METTL21EPA6NDL7 271 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 RFXANKO14593 260 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 CBX6O95503 412 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 LDLRAP1Q5SW96 308 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 CERCAMQ5T4B2 595 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 FAM91A1Q658Y4 838 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 FAM183BPQ6ZVS7 135 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 DET1Q7L5Y6 550 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 TTC7BQ86TV6 843 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 TTLQ8NG68 377 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 NXF3Q9H4D5 531 aaKnown RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 DNAAF2Q9NVR5 837 aaKnown RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 WBP11Q9Y2W2 641 aaKnown RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 N6AMT1Q9Y5N5 214 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 GNPDA1P46926 289 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 LIPEQ05469 1076 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 ITPK1Q13572 414 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 SLC30A10Q6XR72 485 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 RAVER1Q8IY67 606 aaKnown RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 RFKQ969G6 155 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 HOPXQ9BPY8 73 aaPredicted RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 MEMO1Q9Y316 297 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 DDX3XO00571 662 aaKnown RBP eCLIP9.67□□□□□ -0.861e-8■■□□□ 13.3
CUX1-203ENST00000360264 MANFP55145 182 aaKnown RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 CXCL9Q07325 125 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 INTS5Q6P9B9 1019 aaKnown RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 LOC110117498-PIK3R3F6TDL0 507 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 SLITRK3O94933 977 aa9.67□□□□□ -0.86
CUX1-203ENST00000360264 RFX5P48382 616 aaPredicted RBP9.67□□□□□ -0.86
CUX1-203ENST00000360264 SLC7A2P52569 658 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms