RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 TTC9BQ8N6N2 239 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 OR13C4Q8NGS5 318 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 TWIST2Q8WVJ9 160 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 BTN2A3PQ96KV6 586 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 ZNF597Q96LX8 424 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 CIB1Q99828 191 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 POLR1EQ9GZS1 481 aaKnown RBP8.59□□□□□ -1.03
RFX3-202ENST00000358730 GMPR2Q9P2T1 348 aaKnown RBP8.59□□□□□ -1.03
RFX3-202ENST00000358730 DNAJC15Q9Y5T4 150 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 IGLV3-10A0A075B6K4 115 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 LOC285095A0A1B0GVY8 99 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 CCDC162PA2VCL2 907 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 C9JVG2 144 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 PPP6CO00743 305 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 TIPRLO75663 272 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 CDK14O94921 469 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 IGHA2P01877 340 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 FGF1P05230 155 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 ATP6V1B2P21281 511 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 GPX3P22352 226 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 OR1E1P30953 314 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 ACVRL1P37023 503 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 GRIA3P42263 894 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 CLCN2P51788 898 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 FOXA1P55317 472 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 HUNKP57058 714 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 INHBEP58166 350 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 IL10RBQ08334 325 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 SEMA3AQ14563 771 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 NFE2Q16621 373 aaPredicted RBP8.58□□□□□ -1.04
RFX3-202ENST00000358730 UGT3A2Q3SY77 523 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 C8orf82Q6P1X6 216 aaPredicted RBP8.58□□□□□ -1.04
RFX3-202ENST00000358730 C17orf99Q6UX52 265 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 RETREG3Q86VR2 466 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 ZNF280BQ86YH2 543 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 MYO1HQ8N1T3 1032 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 ROPN1LQ96C74 230 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 NSUN5Q96P11 429 aaKnown RBP8.58□□□□□ -1.04
RFX3-202ENST00000358730 KCNA7Q96RP8 456 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 NOL11Q9H8H0 719 aaKnown RBP8.58□□□□□ -1.04
RFX3-202ENST00000358730 CATSPERZQ9NTU4 200 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 HACD3Q9P035 362 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 DMTF1Q9Y222 760 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 PRG3Q9Y2Y8 225 aaPredicted RBP8.58□□□□□ -1.04
RFX3-202ENST00000358730 ANKRD36A6QL64 1941 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 TANC1Q9C0D5 1861 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 A0A1B0GTW7 788 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 BBIP1A8MTZ0 92 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 H3BMM5 538 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 AZIN1O14977 448 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 ANGPT2O15123 496 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 MUSKO15146 869 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 AKAP10O43572 662 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 RPP40O75818 363 aaKnown RBP8.58□□□□□ -1.04
RFX3-202ENST00000358730 CYBAP13498 195 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 NELFEP18615 380 aaKnown RBP8.58□□□□□ -1.04
RFX3-202ENST00000358730 HLA-DPA1P20036 260 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 OR1G1P47890 313 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 ACVR1Q04771 509 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 MYLK3Q32MK0 819 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 USP41Q3LFD5 358 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 PARP15Q460N3 678 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 C10orf120Q5SQS8 335 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 HMBOX1Q6NT76 420 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 GLB1LQ6UWU2 654 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 MIER2Q8N344 545 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 OR2T34Q8NGX1 318 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 OR2T3Q8NH03 318 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 FBXO32Q969P5 355 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 TADA1Q96BN2 335 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 FUBP3Q96I24 572 aaKnown RBP eCLIP8.58□□□□□ -1.04
RFX3-202ENST00000358730 C8orf48Q96LL4 319 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 ASB2Q96Q27 587 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 OSBPL11Q9BXB4 747 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 RBM38Q9H0Z9 239 aaKnown RBP8.58□□□□□ -1.04
RFX3-202ENST00000358730 MARCH2Q9P0N8 246 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 NOD1Q9Y239 953 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 SLC12A8A0AV02 714 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 UBA6A0AVT1 1052 aaPredicted RBP8.58□□□□□ -1.04
RFX3-202ENST00000358730 SUPT3HB4E1H0 165 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 H0YJX3 145 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 NME4O00746 187 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 SUPT3HO75486 399 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 SOAT2O75908 522 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 PRSS56P0CW18 603 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 HOXB8P17481 243 aaPredicted RBP8.58□□□□□ -1.04
RFX3-202ENST00000358730 CAPN3P20807 821 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 TIAL1Q01085 375 aaKnown RBP eCLIP8.58□□□□□ -1.04
RFX3-202ENST00000358730 SERINC3Q13530 473 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 GRB7Q14451 532 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 TRIP4Q15650 581 aaPredicted RBP8.58□□□□□ -1.04
RFX3-202ENST00000358730 VPS26BQ4G0F5 336 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 KANK2Q63ZY3 851 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 KRT80Q6KB66 452 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 B3GNT6Q6ZMB0 384 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 ZNF598Q86UK7 904 aaKnown RBP8.58□□□□□ -1.04
RFX3-202ENST00000358730 FAM110BQ8TC76 370 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 TRPC4APQ8TEL6 797 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 DDI1Q8WTU0 396 aa8.58□□□□□ -1.04
RFX3-202ENST00000358730 CANT1Q8WVQ1 401 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms