RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 PCID2Q5JVF3 399 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 FNBP1LQ5T0N5 605 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 ARMCX6Q7L4S7 300 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 EID2BQ96D98 161 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 NUS1Q96E22 293 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 COQ10AQ96MF6 247 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 RANBP9Q96S59 729 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 DUSP15Q9H1R2 295 aaPredicted RBP15.23■□□□□ 0.03
TPM1-206ENST00000358278 GDF3Q9NR23 364 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 MTRF1LQ9UGC7 380 aaKnown RBP15.23■□□□□ 0.03
TPM1-206ENST00000358278 CD84Q9UIB8 345 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 FNDC3AQ9Y2H6 1198 aaKnown RBP15.23■□□□□ 0.03
TPM1-206ENST00000358278 TCAF1Q9Y4C2 921 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 MAD1L1Q9Y6D9 718 aa15.23■□□□□ 0.03
TPM1-206ENST00000358278 KNL1Q8NG31 2342 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 METTL12A8MUP2 240 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 SPINT3P49223 89 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 DHPSP49366 369 aaPredicted RBP15.22■□□□□ 0.03
TPM1-206ENST00000358278 ZNF140P52738 457 aaPredicted RBP15.22■□□□□ 0.03
TPM1-206ENST00000358278 DHX9Q08211 1270 aaKnown RBP15.22■□□□□ 0.03
TPM1-206ENST00000358278 SIM2Q14190 667 aaPredicted RBP15.22■□□□□ 0.03
TPM1-206ENST00000358278 PMS2CLQ68D20 193 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 ZDHHC24Q6UX98 284 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 PRR23BQ6ZRT6 265 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 Q6ZVL8 140 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 CENPUQ71F23 418 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 CCDC25Q86WR0 208 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 SLC41A1Q8IVJ1 513 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 MPP5Q8N3R9 675 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 OR4K2Q8NGD2 314 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 PTCD2Q8WV60 388 aaKnown RBP15.22■□□□□ 0.03
TPM1-206ENST00000358278 DTD2Q96FN9 168 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 MYOCQ99972 504 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 C1QTNF2Q9BXJ5 285 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 ZDHHC18Q9NUE0 388 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 KCTD5Q9NXV2 234 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 KCTD3Q9Y597 815 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 CACNA1EQ15878 2313 aa15.22■□□□□ 0.03
TPM1-206ENST00000358278 PIKFYVEQ9Y2I7 2098 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 LILRB5O75023 590 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 BANF1O75531 89 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 GM2AP17900 193 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 NUDT1P36639 197 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 HADHAP40939 763 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 CARSP49589 748 aaKnown RBP15.21■□□□□ 0.03
TPM1-206ENST00000358278 PDIA2Q13087 525 aaKnown RBP15.21■□□□□ 0.03
TPM1-206ENST00000358278 FGL2Q14314 439 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 PLK5Q496M5 336 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 MSS51Q4VC12 460 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 SPDYCQ5MJ68 293 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 NLRP9Q7RTR0 991 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 CYP2U1Q7Z449 544 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 RAVER1Q8IY67 606 aaKnown RBP15.21■□□□□ 0.03
TPM1-206ENST00000358278 RGL4Q8IZJ4 473 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 OR13C4Q8NGS5 318 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 STYXQ8WUJ0 223 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 DNAJC1Q96KC8 554 aaKnown RBP15.21■□□□□ 0.03
TPM1-206ENST00000358278 FMO2Q99518 471 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 FZD3Q9NPG1 666 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 CHRAC1Q9NRG0 131 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 RAD18Q9NS91 495 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 IL17CQ9P0M4 197 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 SOX13Q9UN79 622 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 R4GN57 208 aa15.21■□□□□ 0.03
TPM1-206ENST00000358278 RGSL1A5PLK6 1076 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 MROH6A6NGR9 719 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 RHOBTB1O94844 696 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 HNRNPA2B1P22626 353 aaKnown RBP15.2■□□□□ 0.02
TPM1-206ENST00000358278 AKT2P31751 481 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 PTGER3P43115 390 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 TMPRSS15P98073 1019 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 CREB5Q02930 508 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 PTPRCAPQ14761 206 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 LRRC14Q15048 493 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 SKIDA1Q1XH10 827 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 WDR45BQ5MNZ6 344 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 TSTD2Q5T7W7 516 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 ZDHHC20Q5W0Z9 365 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 LYSMD4Q5XG99 296 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 ALS2CLQ60I27 953 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 RFLNAQ6ZTI6 216 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 TECPR1Q7Z6L1 1165 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 NRSN1Q8IZ57 195 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 CBARPQ8N350 705 aaPredicted RBP15.2■□□□□ 0.02
TPM1-206ENST00000358278 PRSS33Q8NF86 280 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 ASB12Q8WXK4 309 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 RUBCNQ92622 972 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 AP2M1Q96CW1 435 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 STAMBPL1Q96FJ0 436 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 SIGLEC10Q96LC7 697 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 FOXP3Q9BZS1 431 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 MIR1-1HGQ9H1L0 117 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 EPC1Q9H2F5 836 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 ANKZF1Q9H8Y5 726 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 MRM3Q9HC36 420 aaKnown RBP15.2■□□□□ 0.02
TPM1-206ENST00000358278 EIF2B4Q9UI10 523 aaKnown RBP15.2■□□□□ 0.02
TPM1-206ENST00000358278 NFU1Q9UMS0 254 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 DMTF1Q9Y222 760 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 A0A1W2PPC4 97 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 MAGEB16A2A368 324 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms