RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 MDM1Q8TC05 714 aa18.14■□□□□ 0.49
SMARCD3-202ENST00000356800 RBBP8Q99708 897 aa18.14■□□□□ 0.49
SMARCD3-202ENST00000356800 PCDH12Q9NPG4 1184 aa18.14■□□□□ 0.49
SMARCD3-202ENST00000356800 TXNDC16Q9P2K2 825 aa18.14■□□□□ 0.49
SMARCD3-202ENST00000356800 FBXO5Q9UKT4 447 aa18.14■□□□□ 0.49
SMARCD3-202ENST00000356800 LRRK1Q38SD2 2015 aa18.14■□□□□ 0.49
SMARCD3-202ENST00000356800 COL6A3P12111 3177 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 TYROBPO43914 113 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 AHSGP02765 367 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 PRSS56P0CW18 603 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 CHN1P15882 459 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 DRD1P21728 446 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 ITGB7P26010 798 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 GUCY1A3Q02108 690 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 GRSF1Q12849 480 aaKnown RBP eCLIP18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 SLC44A4Q53GD3 710 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 MROH9Q5TGP6 573 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 LRRC66Q68CR7 880 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 MMAAQ8IVH4 418 aaKnown RBP18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 NDUFAF2Q8N183 169 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 IL17RCQ8NAC3 791 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 OR4L1Q8NH43 312 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 SERAC1Q96JX3 654 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 KCNK9Q9NPC2 374 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 TRIOO75962 3097 aa18.13■□□□□ 0.49
SMARCD3-202ENST00000356800 FAM47DPA6NHR8 397 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 H7C0S8 307 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 PLK4O00444 970 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 SPINT1O43278 529 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 ADAM23O75077 832 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 IL1BP01584 269 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 ITGA2BP08514 1039 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 CSE1LP55060 971 aaKnown RBP18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 XIAPP98170 497 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 PTSQ03393 145 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 PEX6Q13608 980 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 MPP2Q14168 576 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 SEMA3AQ14563 771 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 ZNF789Q5FWF6 425 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 TTC7BQ86TV6 843 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 LDB1Q86U70 411 aaPredicted RBP18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 ZC3HC1Q86WB0 502 aaKnown RBP18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 CILP2Q8IUL8 1156 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 C4orf33Q8N1A6 199 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 GPR150Q8NGU9 434 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 CALML6Q8TD86 181 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 GABRG3Q99928 467 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 INTS9Q9NV88 658 aaKnown RBP18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 PKP3Q9Y446 797 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 GAPDHSO14556 408 aaPredicted RBP18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 CD3EAPO15446 510 aaKnown RBP18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 BPIP17213 487 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 CD72P21854 359 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 NTSR1P30989 418 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 FOXN2P32314 431 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 LIMK2P53671 638 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 GNGT1P63211 74 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 PPARDQ03181 441 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 SLC18A2Q05940 514 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 E2F5Q15329 346 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 KIAA1211LQ6NV74 962 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 AFTPHQ6ULP2 937 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 ADHFE1Q8IWW8 467 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 BANPQ8N9N5 519 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 ACVR1CQ8NER5 493 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 KCNV2Q8TDN2 545 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 ATXN7L3BQ96GX2 97 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 SGSM3Q96HU1 749 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 KLF6Q99612 283 aaPredicted RBP18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 C19orf43Q9BQ61 176 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 RSPH9Q9H1X1 276 aaPredicted RBP18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 FBXO6Q9NRD1 293 aaPredicted RBP18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 CATSPERZQ9NTU4 200 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 DUSP12Q9UNI6 340 aa18.12■□□□□ 0.49
SMARCD3-202ENST00000356800 RFPL1O75677 317 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 KLF8O95600 359 aaPredicted RBP18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 S1PR4O95977 384 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 C1SP09871 688 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 VIPR1P32241 457 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 MC4RP32245 332 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 SPRP35270 261 aaPredicted RBP18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 MMP12P39900 470 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 HADHAP40939 763 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 PSMD8P48556 350 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 CDKN1CP49918 316 aaPredicted RBP18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 ZP2Q05996 745 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 RALGDSQ12967 914 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 RFLNAQ6ZTI6 216 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 KIAA0408Q6ZU52 694 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 DSG4Q86SJ6 1040 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 LMNTD2Q8IXW0 634 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 GABPB2Q8TAK5 448 aaPredicted RBP18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 ATXN2LQ8WWM7 1075 aaKnown RBP18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 FAM3CQ92520 227 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 MSANTD3Q96H12 275 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 VPS39Q96JC1 886 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 NKIRAS1Q9NYS0 192 aa18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 FNDC3AQ9Y2H6 1198 aaKnown RBP18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 MTO1Q9Y2Z2 717 aaKnown RBP18.11■□□□□ 0.49
SMARCD3-202ENST00000356800 PLXNB3Q9ULL4 1909 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms