RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 SEMG2Q02383 582 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 SEMA3AQ14563 771 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 ELAVL3Q14576 367 aaKnown RBP13.61□□□□□ -0.23
HOXA1-202ENST00000355633 SEPT7Q16181 437 aaKnown RBP13.61□□□□□ -0.23
HOXA1-202ENST00000355633 ZNF789Q5FWF6 425 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 LRRC73Q5JTD7 316 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 PRPF38BQ5VTL8 546 aaKnown RBP13.61□□□□□ -0.23
HOXA1-202ENST00000355633 LRRC66Q68CR7 880 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 CMC1Q7Z7K0 106 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 HCAR2Q8TDS4 363 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 SLC13A1Q9BZW2 595 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 IQCGQ9H095 443 aaKnown RBP13.61□□□□□ -0.23
HOXA1-202ENST00000355633 CAB39LQ9H9S4 337 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 ZDHHC4Q9NPG8 344 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 CACNA2D2Q9NY47 1150 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 SUN2Q9UH99 717 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 HCN2Q9UL51 889 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 SLC39A10Q9ULF5 831 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 FAM95CA0A1B0GW59 222 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 UPK3BL1B0FP48 263 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 UPK3BL2E5RIL1 263 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 SPECC1L-ADORA2AF8WAN1 911 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 KPNA3O00505 521 aaPredicted RBP13.61□□□□□ -0.23
HOXA1-202ENST00000355633 S1PR4O95977 384 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 EPHX1P07099 455 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 HNRNPLP14866 589 aaKnown RBP eCLIP13.61□□□□□ -0.23
HOXA1-202ENST00000355633 FOSL2P15408 326 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 SAT1P21673 171 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 XPAP23025 273 aaPredicted RBP13.61□□□□□ -0.23
HOXA1-202ENST00000355633 PMLP29590 882 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 FOXN2P32314 431 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 LSP1P33241 339 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 MAGEA12P43365 314 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 TNFRSF4P43489 277 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 CCT5P48643 541 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 CLCN5P51795 746 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 PEX6Q13608 980 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 USP10Q14694 798 aaKnown RBP13.61□□□□□ -0.23
HOXA1-202ENST00000355633 E2F5Q15329 346 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 TYSND1Q2T9J0 566 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 ZRANB3Q5FWF4 1079 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 TAX1BP1Q86VP1 789 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 SLC44A3Q8N4M1 653 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 PNPLA1Q8N8W4 532 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 GPATCH11Q8N954 259 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 ACVR1CQ8NER5 493 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 TMIEQ8NEW7 156 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 DENND1AQ8TEH3 1009 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 HLA-CQ95604 372 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 ACOX2Q99424 681 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 PAIP2Q9BPZ3 127 aaKnown RBP13.61□□□□□ -0.23
HOXA1-202ENST00000355633 TRPV5Q9NQA5 729 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 B4GALT6Q9UBX8 382 aa13.61□□□□□ -0.23
HOXA1-202ENST00000355633 COL4A2P08572 1712 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 C16orf96A6NNT2 1141 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 MPOP05164 745 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 PRSS56P0CW18 603 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 CYP2A6P11509 494 aaPredicted RBP13.6□□□□□ -0.23
HOXA1-202ENST00000355633 TIMP2P16035 220 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 LHCGRP22888 699 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 POLD2P49005 469 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 STC1P52823 247 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 XIAPP98170 497 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 ILF2Q12905 390 aaKnown RBP13.6□□□□□ -0.23
HOXA1-202ENST00000355633 PDE1CQ14123 709 aaPredicted RBP13.6□□□□□ -0.23
HOXA1-202ENST00000355633 TERF2Q15554 542 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 POM121L1PQ3SYA9 428 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 TTC7BQ86TV6 843 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 SLC41A1Q8IVJ1 513 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 CHPFQ8IZ52 775 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 ZNF513Q8N8E2 541 aaPredicted RBP13.6□□□□□ -0.23
HOXA1-202ENST00000355633 GDAP1Q8TB36 358 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 PIP4K2CQ8TBX8 421 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 SCG3Q8WXD2 468 aaKnown RBP13.6□□□□□ -0.23
HOXA1-202ENST00000355633 PBXIP1Q96AQ6 731 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 ELMO2Q96JJ3 720 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 CABS1Q96KC9 395 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 VPS11Q9H270 941 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 INTS10Q9NVR2 710 aaKnown RBP13.6□□□□□ -0.23
HOXA1-202ENST00000355633 SLC17A7Q9P2U7 560 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 SARDHQ9UL12 918 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 PPM1HQ9ULR3 514 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 SLC30A1Q9Y6M5 507 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 STON1Q9Y6Q2 735 aa13.6□□□□□ -0.23
HOXA1-202ENST00000355633 ZNF106Q9H2Y7 1883 aaKnown RBP13.6□□□□□ -0.23
HOXA1-202ENST00000355633 GLRA3O75311 464 aa13.59□□□□□ -0.23
HOXA1-202ENST00000355633 ASMTLO95671 621 aa13.59□□□□□ -0.23
HOXA1-202ENST00000355633 BPIP17213 487 aa13.59□□□□□ -0.23
HOXA1-202ENST00000355633 VIPR1P32241 457 aa13.59□□□□□ -0.23
HOXA1-202ENST00000355633 CRHR1P34998 444 aa13.59□□□□□ -0.23
HOXA1-202ENST00000355633 WDR4P57081 412 aaKnown RBP13.59□□□□□ -0.23
HOXA1-202ENST00000355633 ARHGEF7Q14155 803 aa13.59□□□□□ -0.23
HOXA1-202ENST00000355633 PPM1JQ5JR12 505 aa13.59□□□□□ -0.23
HOXA1-202ENST00000355633 HHATQ5VTY9 493 aa13.59□□□□□ -0.23
HOXA1-202ENST00000355633 PSAPL1Q6NUJ1 521 aa13.59□□□□□ -0.23
HOXA1-202ENST00000355633 TXNDC11Q6PKC3 985 aa13.59□□□□□ -0.23
HOXA1-202ENST00000355633 LVRNQ6Q4G3 990 aa13.59□□□□□ -0.23
HOXA1-202ENST00000355633 CDHR3Q6ZTQ4 885 aa13.59□□□□□ -0.23
HOXA1-202ENST00000355633 RAPH1Q70E73 1250 aa13.59□□□□□ -0.23
HOXA1-202ENST00000355633 PARS2Q7L3T8 475 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms