RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 GDF10P55107 478 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 SMU1Q2TAY7 513 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 NADSYN1Q6IA69 706 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 ADGRD2Q7Z7M1 963 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 RALGPS2Q86X27 583 aaPredicted RBP10.14□□□□□ -0.79
SYNE1-203ENST00000354674 CADM3Q8N126 398 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 ELMOD1Q8N336 334 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 CCDC89Q8N998 374 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 C7orf57Q8NEG2 295 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 AGR3Q8TD06 166 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 SNF8Q96H20 258 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 SLC13A1Q9BZW2 595 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 ZDHHC7Q9NXF8 308 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 WHRNQ9P202 907 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 SOBPA7XYQ1 873 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.13□□□□□ -0.79
SYNE1-203ENST00000354674 TAF4O00268 1085 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 NRG2O14511 850 aaPredicted RBP10.13□□□□□ -0.79
SYNE1-203ENST00000354674 TOR1BO14657 336 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 GREM1O60565 184 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 STC2O76061 302 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 DLDP09622 509 aaKnown RBP10.13□□□□□ -0.79
SYNE1-203ENST00000354674 KCNQ1P51787 676 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 RAP1GDS1P52306 607 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 PRKD1Q15139 912 aaPredicted RBP10.13□□□□□ -0.79
SYNE1-203ENST00000354674 DUSP6Q16828 381 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 RGS21Q2M5E4 152 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 GALNT18Q6P9A2 607 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 TDHQ8IZJ6 230 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 LZTR1Q8N653 840 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 NPWQ8N729 165 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 SIK2Q9H0K1 926 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 RETREG1Q9H6L5 497 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 DPP7Q9UHL4 492 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 ITGB1BP2Q9UKP3 347 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 RANBP2P49792 3224 aaKnown RBP10.13□□□□□ -0.79
SYNE1-203ENST00000354674 F8W8V4 182 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 CCL16O15467 120 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 LATS1O95835 1130 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 NCF2P19878 526 aaPredicted RBP10.13□□□□□ -0.79
SYNE1-203ENST00000354674 GABRR2P28476 465 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 SLC7A9P82251 487 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 KRT80Q6KB66 452 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 CCDC81Q6ZN84 652 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 FAM156AQ8NDB6 213 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 ADAMTS19Q8TE59 1207 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 USP13Q92995 863 aaPredicted RBP10.13□□□□□ -0.79
SYNE1-203ENST00000354674 TP63Q9H3D4 680 aaPredicted RBP10.13□□□□□ -0.79
SYNE1-203ENST00000354674 CATSPERBQ9H7T0 1116 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 HCFC2Q9Y5Z7 792 aa10.13□□□□□ -0.79
SYNE1-203ENST00000354674 MEN1O00255 615 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 NCAM2O15394 837 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 MOSPD3O75425 235 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 MOCS2O96007 188 aaPredicted RBP10.12□□□□□ -0.79
SYNE1-203ENST00000354674 KLKB1P03952 638 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 PTPN2P17706 415 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 ITIH2P19823 946 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 IST1P53990 364 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 TMPRSS15P98073 1019 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 GALNT2Q10471 571 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 DARS2Q6PI48 645 aaKnown RBP10.12□□□□□ -0.79
SYNE1-203ENST00000354674 RHBDF2Q6PJF5 856 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 PDZD4Q76G19 769 aaPredicted RBP10.12□□□□□ -0.79
SYNE1-203ENST00000354674 SETD3Q86TU7 594 aaPredicted RBP10.12□□□□□ -0.79
SYNE1-203ENST00000354674 CDKL3Q8IVW4 592 aaPredicted RBP10.12□□□□□ -0.79
SYNE1-203ENST00000354674 LEMD2Q8NC56 503 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 CITED4Q96RK1 184 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 SLC22A12Q96S37 553 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 NUF2Q9BZD4 464 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 MIR1-1HGQ9H1L0 117 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 PARVBQ9HBI1 364 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 ASAH2Q9NR71 780 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 DNMT3BQ9UBC3 853 aaKnown RBP10.12□□□□□ -0.79
SYNE1-203ENST00000354674 PLA2G4CQ9UP65 541 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 BOLA1Q9Y3E2 137 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 DGKBQ9Y6T7 804 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 NOTCH4Q99466 2003 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 DOCK4Q8N1I0 1966 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.12□□□□□ -0.79
SYNE1-203ENST00000354674 SGK1O00141 431 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 ACSL4O60488 711 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 ICMTO60725 284 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 RFPL2O75678 378 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 TOP3BO95985 862 aaKnown RBP10.12□□□□□ -0.79
SYNE1-203ENST00000354674 GRK2P25098 689 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 CCR2P41597 374 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 PKNOX1P55347 436 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 SMAD3P84022 425 aaKnown RBP10.12□□□□□ -0.79
SYNE1-203ENST00000354674 ZXDBP98169 803 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 ZNF33AQ06730 810 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 PRSS36Q5K4E3 855 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 TXNDC8Q6A555 127 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 FBXL22Q6P050 247 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 Q6ZNB5 142 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 TMEM26Q6ZUK4 368 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 RTL3Q8N8U3 475 aaKnown RBP10.12□□□□□ -0.79
SYNE1-203ENST00000354674 ZNF707Q96C28 371 aaPredicted RBP10.12□□□□□ -0.79
SYNE1-203ENST00000354674 CDH19Q9H159 772 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 CERS4Q9HA82 394 aa10.12□□□□□ -0.79
SYNE1-203ENST00000354674 TMEM248Q9NWD8 314 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms