RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CLEC11AQ9Y240 323 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 NME7Q9Y5B8 376 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 TNPO3Q9Y5L0 923 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 FKBP7Q9Y680 259 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 GRIN2AQ12879 1464 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ASXL2Q76L83 1435 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 FAM86C2PA6NEL3 165 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 PLEKHA8P1O95397 391 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 PNPP00491 289 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 AGTR1P30556 359 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 RFX3P48380 749 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 FXR1P51114 621 aaKnown RBP eCLIP6.17□□□□□ -1.42
VCAN-203ENST00000343200 GNA12Q03113 381 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 IL27RAQ6UWB1 636 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 SSX9Q7RTT3 188 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 OR7G2Q8NG99 324 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 NXPE2Q96DL1 559 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ACTR8Q9H981 624 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 TMEM8AQ9HCN3 771 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 LNPEPQ9UIQ6 1025 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 USF3Q68DE3 2245 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ASTN2O75129 1339 aaPredicted RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 IGSF9BQ9UPX0 1349 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ABCA6Q8N139 1617 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 TVP23AA6NH52 213 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 TUBAL3A6NHL2 446 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 HNRNPFP52597 415 aaKnown RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 IL2P60568 153 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 MTM1Q13496 603 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 ACVR2BQ13705 512 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 BTBD8Q5XKL5 378 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 RASGEF1AQ8N9B8 481 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 DNAAF1Q8NEP3 725 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 DENND2DQ9H6A0 471 aaPredicted RBP6.17□□□□□ -1.42
VCAN-203ENST00000343200 NMRK2Q9NPI5 230 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 SCUBE2Q9NQ36 999 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 LRRC4BQ9NT99 713 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 TLL2Q9Y6L7 1015 aa6.17□□□□□ -1.42
VCAN-203ENST00000343200 RGPD3A6NKT7 1758 aaPredicted RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 TRIM38O00635 465 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 OPLAHO14841 1288 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ZW10O43264 779 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 GLP2RO95838 553 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SBK2P0C263 348 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 KCNJ1P48048 391 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 DRG2P55039 364 aaKnown RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 GRK1Q15835 563 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 INSCQ1MX18 579 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 IQSEC1Q6DN90 963 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SPATA22Q8NHS9 363 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SEMA4DQ92854 862 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ZNF408Q9H9D4 720 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 TAS2R9Q9NYW1 312 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 RAB19A4D1S5 217 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CAPN8A6NHC0 703 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 E9PI62 339 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SERPINB7O75635 380 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 MLYCDO95822 493 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 DRD4P21917 467 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ADORA2BP29275 332 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ARL4DP49703 201 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 MYL6P60660 151 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CACNB2Q08289 660 aaPredicted RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 BMT2Q1RMZ1 405 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 MFSD7Q6UXD7 560 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 RAD9BQ6WBX8 426 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 COMMD7Q86VX2 200 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 FBXO25Q8TCJ0 367 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 RAD51AP1Q96B01 352 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 C3orf49Q96BT1 292 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 YIPF2Q9BWQ6 316 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 POLR3FQ9H1D9 316 aaPredicted RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 SAGE1Q9NXZ1 904 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ENTPD4Q9Y227 616 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 MAGED1Q9Y5V3 778 aaPredicted RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 LOC100509620A0A075B734 347 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ADAM10O14672 748 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SHOXO15266 292 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 OR10H3O60404 316 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 NRP2O60462 931 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CYP7B1O75881 506 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CPSF4O95639 269 aaKnown RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 LSM8O95777 96 aaKnown RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 CSF1RP07333 972 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ABHD2P08910 425 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ZDHHC11BP0C7U3 371 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 GZMAP12544 262 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 EPB42P16452 691 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 UBA1P22314 1058 aaKnown RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 MZF1P28698 734 aaPredicted RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 ETFBP38117 255 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ARCN1P48444 511 aaKnown RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 GMPSP49915 693 aaPredicted RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 TMEM132DQ14C87 1099 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 LRIF1Q5T3J3 769 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ZBTB46Q86UZ6 589 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CENPSQ8N2Z9 138 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 TSEN15Q8WW01 171 aaKnown RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 ITPKCQ96DU7 683 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CCDC17Q96LX7 622 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms