RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PLEKHH3Q7Z736 793 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 ISCA2Q86U28 154 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 OR10T2Q8NGX3 314 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 MAELQ96JY0 434 aaKnown RBP14.39□□□□□ -0.11
CPSF7-201ENST00000340437 SPON2Q9BUD6 331 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 ADI1Q9BV57 179 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 DOLKQ9UPQ8 538 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 SLC22A2O15244 555 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 KPNA6O60684 536 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 RHOBTB1O94844 696 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 CELF2O95319 508 aaKnown RBP14.39□□□□□ -0.11
CPSF7-201ENST00000340437 PIM1P11309 404 aaPredicted RBP14.39□□□□□ -0.11
CPSF7-201ENST00000340437 IMPDH1P20839 514 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 HK2P52789 917 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 CRYBB1P53674 252 aaPredicted RBP14.39□□□□□ -0.11
CPSF7-201ENST00000340437 TPD52P55327 224 aaPredicted RBP14.39□□□□□ -0.11
CPSF7-201ENST00000340437 RPL26P61254 145 aaKnown RBP14.39□□□□□ -0.11
CPSF7-201ENST00000340437 TIGD2Q4W5G0 525 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 RAP1GAP2Q684P5 730 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 KLHL35Q6PF15 583 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 SLC15A3Q8IY34 581 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 CLYBLQ8N0X4 340 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 CCDC126Q96EE4 140 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 NAA50Q9GZZ1 169 aaKnown RBP14.39□□□□□ -0.11
CPSF7-201ENST00000340437 ADNPQ9H2P0 1102 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 EPB41L1Q9H4G0 881 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 TREX1Q9NSU2 369 aa14.39□□□□□ -0.11
CPSF7-201ENST00000340437 RGS17Q9UGC6 210 aaPredicted RBP14.39□□□□□ -0.11
CPSF7-201ENST00000340437 AZIN1O14977 448 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 CDK14O94921 469 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 SLC2A3P11169 496 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 EEF1DP29692 281 aaKnown RBP14.38□□□□□ -0.11
CPSF7-201ENST00000340437 CDC42EP1Q00587 391 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 ACAP2Q15057 778 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 SLC39A12Q504Y0 691 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 BHLHA9Q7RTU4 235 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 CILP2Q8IUL8 1156 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 SLC22A9Q8IVM8 553 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 CMTR2Q8IYT2 770 aaKnown RBP14.38□□□□□ -0.11
CPSF7-201ENST00000340437 RIN3Q8TB24 985 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 RMDN1Q96DB5 314 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 CDK15Q96Q40 435 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 RANBP9Q96S59 729 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 IL12RB2Q99665 862 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 SEMA3CQ99985 751 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 MAP10Q9P2G4 905 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 RNF112Q9ULX5 631 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 GLP2RO95838 553 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 GOT2P00505 430 aaKnown RBP14.38□□□□□ -0.11
CPSF7-201ENST00000340437 PRDX3P30048 256 aaKnown RBP14.38□□□□□ -0.11
CPSF7-201ENST00000340437 GRK4P32298 578 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 CLCN5P51795 746 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 OR4D1Q15615 310 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 GNASQ5JWF2 1037 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 CXCL17Q6UXB2 119 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 TMEM26Q6ZUK4 368 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 CFAP52Q8N1V2 620 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 OR13J1Q8NGT2 312 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 C12orf43Q96C57 262 aaKnown RBP14.38□□□□□ -0.11
CPSF7-201ENST00000340437 MUC3BQ9H195 1237 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 CCDC68Q9H2F9 335 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 SLC38A7Q9NVC3 462 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 TBC1D13Q9NVG8 400 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 PCDH10Q9P2E7 1040 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 A0A1W2PPW3 197 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 F2P00734 622 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 C8BP07358 591 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 AGTR2P50052 363 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 TMEM214Q6NUQ4 689 aaKnown RBP14.38□□□□□ -0.11
CPSF7-201ENST00000340437 CAMK1DQ8IU85 385 aa14.38□□□□□ -0.11
CPSF7-201ENST00000340437 RPRD1AQ96P16 312 aaPredicted RBP14.38□□□□□ -0.11
CPSF7-201ENST00000340437 DUS2Q9NX74 493 aaKnown RBP14.38□□□□□ -0.11
CPSF7-201ENST00000340437 PRG3Q9Y2Y8 225 aaPredicted RBP14.38□□□□□ -0.11
CPSF7-201ENST00000340437 ODC1P11926 461 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 SIRPB2Q5JXA9 342 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 LARP4Q71RC2 724 aaKnown RBP eCLIP14.37□□□□□ -0.11
CPSF7-201ENST00000340437 CARM1Q86X55 608 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 GABPB2Q8TAK5 448 aaPredicted RBP14.37□□□□□ -0.11
CPSF7-201ENST00000340437 KCTD14Q9BQ13 255 aaPredicted RBP14.37□□□□□ -0.11
CPSF7-201ENST00000340437 SLC2A11Q9BYW1 496 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 CMTM6Q9NX76 183 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 TMEM181Q9P2C4 612 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 FADS3Q9Y5Q0 445 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 MAGED1Q9Y5V3 778 aaPredicted RBP14.37□□□□□ -0.11
CPSF7-201ENST00000340437 CLASP2O75122 1294 aaKnown RBP14.37□□□□□ -0.11
CPSF7-201ENST00000340437 HSPA1AP0DMV8 641 aaKnown RBP14.37□□□□□ -0.11
CPSF7-201ENST00000340437 HSPA1BP0DMV9 641 aaKnown RBP14.37□□□□□ -0.11
CPSF7-201ENST00000340437 ADRA1AP35348 466 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 DNAJB13P59910 316 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 TSPY1Q01534 308 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 MERTKQ12866 999 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 TEX37Q96LM6 180 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 PRKD2Q9BZL6 878 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 CXorf21Q9HAI6 301 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 PLK2Q9NYY3 685 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 PTCH2Q9Y6C5 1203 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 TCRBV3S1A0A5B6 114 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 ARPC2O15144 300 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 KATNA1O75449 491 aa14.37□□□□□ -0.11
CPSF7-201ENST00000340437 S1PR4O95977 384 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms