RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 TSSK4Q6SA08 328 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 TMEM135Q86UB9 458 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 C1orf210Q8IVY1 113 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 TTC30BQ8N4P2 665 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 FBXL6Q8N531 539 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 EID2BQ96D98 161 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 TTC25Q96NG3 672 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 FCRL3Q96P31 734 aaPredicted RBP14.74□□□□□ -0.05
CSRP1-201ENST00000340006 RUFY1Q96T51 708 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 MRM3Q9HC36 420 aaKnown RBP14.74□□□□□ -0.05
CSRP1-201ENST00000340006 LRRC4CQ9HCJ2 640 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 NINJ2Q9NZG7 142 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 PKD2L2Q9NZM6 624 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 INVSQ9Y283 1065 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 DOCK9Q9BZ29 2069 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 LRRK1Q38SD2 2015 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 IGLON5A6NGN9 336 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 LRRC72A6NJI9 287 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 H0Y858 1186 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 CCL22O00626 93 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 PLRG1O43660 514 aaKnown RBP14.74□□□□□ -0.05
CSRP1-201ENST00000340006 USP1O94782 785 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 VAPBO95292 243 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 ADPRHP54922 357 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 CBLBQ13191 982 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 SGCGQ13326 291 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 SPANXN3Q5MJ09 141 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 UNC5AQ6ZN44 842 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 HSD11B1LQ7Z5J1 315 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 RASSF3Q86WH2 238 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 TMEM105Q8N8V8 129 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 OR2W6PQ8NHA6 318 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 UHMK1Q8TAS1 419 aaKnown RBP14.74□□□□□ -0.05
CSRP1-201ENST00000340006 HDAC10Q969S8 669 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 DNAJC1Q96KC8 554 aaKnown RBP14.74□□□□□ -0.05
CSRP1-201ENST00000340006 TBATAQ96M53 351 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 SGK2Q9HBY8 427 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 NLE1Q9NVX2 485 aaPredicted RBP14.74□□□□□ -0.05
CSRP1-201ENST00000340006 IL17CQ9P0M4 197 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 USP36Q9P275 1121 aaKnown RBP14.74□□□□□ -0.05
CSRP1-201ENST00000340006 CD84Q9UIB8 345 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 COQ6Q9Y2Z9 468 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 FAM169AQ9Y6X4 670 aa14.74□□□□□ -0.05
CSRP1-201ENST00000340006 AGPSO00116 658 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 AXIN1O15169 862 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 TM7SF2O76062 418 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 PAPSS2O95340 614 aaPredicted RBP14.73□□□□□ -0.05
CSRP1-201ENST00000340006 NUDT17P0C025 328 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 PHBP35232 272 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 RPS21P63220 83 aaKnown RBP14.73□□□□□ -0.05
CSRP1-201ENST00000340006 CSTF1Q05048 431 aaKnown RBP14.73□□□□□ -0.05
CSRP1-201ENST00000340006 RALGDSQ12967 914 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 SMAD1Q15797 465 aaKnown RBP14.73□□□□□ -0.05
CSRP1-201ENST00000340006 USP39Q53GS9 565 aaKnown RBP14.73□□□□□ -0.05
CSRP1-201ENST00000340006 ARMC3Q5W041 872 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 Q6ZVL8 140 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.73□□□□□ -0.05
CSRP1-201ENST00000340006 KLK6Q92876 244 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 TOE1Q96GM8 510 aaKnown RBP14.73□□□□□ -0.05
CSRP1-201ENST00000340006 CDKN2AIPNLQ96HQ2 116 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 WDR83Q9BRX9 315 aaKnown RBP14.73□□□□□ -0.05
CSRP1-201ENST00000340006 KDM4CQ9H3R0 1056 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 SUDS3Q9H7L9 328 aaPredicted RBP14.73□□□□□ -0.05
CSRP1-201ENST00000340006 C20orf96Q9NUD7 363 aaPredicted RBP14.73□□□□□ -0.05
CSRP1-201ENST00000340006 GOLGA8KD6RF30 607 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 GOLGA8TH3BQL2 631 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 K7ESF4 209 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 WNT9AO14904 365 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 SPINT1O43278 529 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 MAP3K13O43283 966 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 RNGTTO60942 597 aaKnown RBP14.73□□□□□ -0.05
CSRP1-201ENST00000340006 NDUFS2O75306 463 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 PAK4O96013 591 aaPredicted RBP14.73□□□□□ -0.05
CSRP1-201ENST00000340006 C7P10643 843 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 C6P13671 934 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 CD6P30203 668 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 MAT2AP31153 395 aaKnown RBP14.73□□□□□ -0.05
CSRP1-201ENST00000340006 ETV3P41162 512 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 SPINT3P49223 89 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 STC1P52823 247 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 CRYMQ14894 314 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 LRIG3Q6UXM1 1119 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 RFLNAQ6ZTI6 216 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 BMP8AQ7Z5Y6 402 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 FAM160A2Q8N612 972 aaPredicted RBP14.73□□□□□ -0.05
CSRP1-201ENST00000340006 FRMD1Q8N878 549 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 DTWD2Q8NBA8 298 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 GSDMBQ8TAX9 411 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 FAM83DQ9H4H8 585 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 PREBQ9HCU5 417 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 IL1RAPL1Q9NZN1 696 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 NFS1Q9Y697 457 aa14.73□□□□□ -0.05
CSRP1-201ENST00000340006 A0A1W2PQU0 124 aa14.72□□□□□ -0.05
CSRP1-201ENST00000340006 PSMD11O00231 422 aa14.72□□□□□ -0.05
CSRP1-201ENST00000340006 RPP40O75818 363 aaKnown RBP14.72□□□□□ -0.05
CSRP1-201ENST00000340006 SEMA4FO95754 770 aa14.72□□□□□ -0.05
CSRP1-201ENST00000340006 SHBGP04278 402 aa14.72□□□□□ -0.05
CSRP1-201ENST00000340006 C1SP09871 688 aa14.72□□□□□ -0.05
CSRP1-201ENST00000340006 BPIP17213 487 aa14.72□□□□□ -0.05
CSRP1-201ENST00000340006 ZNF140P52738 457 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms