RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PIANPQ8IYJ0 282 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 LPGAT1Q92604 370 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 OR52B2Q96RD2 323 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 CD248Q9HCU0 757 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.34■□□□□ 0.53
CCDC43-201ENST00000315286 NCKIPSDQ9NZQ3 722 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 EVLQ9UI08 416 aaPredicted RBP18.34■□□□□ 0.53
CCDC43-201ENST00000315286 INTS6Q9UL03 887 aaKnown RBP18.34■□□□□ 0.53
CCDC43-201ENST00000315286 ARHGAP26Q9UNA1 814 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 FNDC3AQ9Y2H6 1198 aaKnown RBP18.34■□□□□ 0.53
CCDC43-201ENST00000315286 HELZP42694 1942 aaKnown RBP18.34■□□□□ 0.53
CCDC43-201ENST00000315286 ZBTB14O43829 449 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 NDUFS3O75489 264 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 IPO13O94829 963 aaKnown RBP18.34■□□□□ 0.53
CCDC43-201ENST00000315286 BMP1P13497 986 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 CTPS1P17812 591 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 NCF2P19878 526 aaPredicted RBP18.34■□□□□ 0.53
CCDC43-201ENST00000315286 FMO4P31512 558 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 MC4RP32245 332 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 PLK1P53350 603 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 AP1S1P61966 158 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 PLEKHG6Q3KR16 790 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 SEL1L3Q68CR1 1132 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 PSAPL1Q6NUJ1 521 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 PIWIL4Q7Z3Z4 852 aaKnown RBP18.34■□□□□ 0.53
CCDC43-201ENST00000315286 CMTM8Q8IZV2 173 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 RIN3Q8TB24 985 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 SPPL3Q8TCT6 385 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 PTERQ96BW5 349 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 CCDC126Q96EE4 140 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 TCF12Q99081 682 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 LZTS1Q9Y250 596 aa18.34■□□□□ 0.53
CCDC43-201ENST00000315286 PGLSO95336 258 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 CD1DP15813 335 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 ZNF37AP17032 561 aaPredicted RBP18.33■□□□□ 0.52
CCDC43-201ENST00000315286 PFKLP17858 780 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 GKP32189 559 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 PEX6Q13608 980 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 ARMC12Q5T9G4 340 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 PIH1D2Q8WWB5 315 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 EID2BQ96D98 161 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 PHF21BQ96EK2 531 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 CNDP1Q96KN2 507 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 PPP1R36Q96LQ0 422 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 WDR55Q9H6Y2 383 aaPredicted RBP18.33■□□□□ 0.52
CCDC43-201ENST00000315286 POPDC3Q9HBV1 291 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 HACD3Q9P035 362 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 MED16Q9Y2X0 877 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 SLC4A7Q9Y6M7 1214 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 GBF1Q92538 1859 aa18.33■□□□□ 0.52
CCDC43-201ENST00000315286 GOLGA8QA0A0J9YX86 632 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 GOLGA8OA6NCC3 632 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 E9PBE3 544 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 SPECC1L-ADORA2AF8WAN1 911 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 GOLGA8NF8WBI6 632 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 KLHL41O60662 606 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 MOSPD3O75425 235 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 ALPIP09923 528 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 HNRNPLP14866 589 aaKnown RBP eCLIP18.32■□□□□ 0.52
CCDC43-201ENST00000315286 HK2P52789 917 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 TEAD2Q15562 447 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 SETMARQ53H47 684 aaPredicted RBP18.32■□□□□ 0.52
CCDC43-201ENST00000315286 SPRED2Q7Z698 418 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 TMPRSS6Q8IU80 811 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 RYBPQ8N488 228 aaPredicted RBP18.32■□□□□ 0.52
CCDC43-201ENST00000315286 KDM1BQ8NB78 822 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 RBM15BQ8NDT2 890 aaKnown RBP18.32■□□□□ 0.52
CCDC43-201ENST00000315286 MICAL1Q8TDZ2 1067 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 AGAP11Q8TF27 550 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 MYO19Q96H55 970 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 OSBPL1AQ9BXW6 950 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 NUF2Q9BZD4 464 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 TCF7L2Q9NQB0 619 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 TLR9Q9NR96 1032 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 ABCB8Q9NUT2 735 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 ZNF711Q9Y462 761 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 ALPK3Q96L96 1907 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 NEMP1O14524 444 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 ZNF821O75541 412 aaPredicted RBP18.32■□□□□ 0.52
CCDC43-201ENST00000315286 SRP72O76094 671 aaKnown RBP18.32■□□□□ 0.52
CCDC43-201ENST00000315286 RHOBTB1O94844 696 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 SLC20A2Q08357 652 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 PDAP1Q13442 181 aaKnown RBP18.32■□□□□ 0.52
CCDC43-201ENST00000315286 RPS27LQ71UM5 84 aaKnown RBP18.32■□□□□ 0.52
CCDC43-201ENST00000315286 SUGP1Q8IWZ8 645 aaKnown RBP18.32■□□□□ 0.52
CCDC43-201ENST00000315286 DNAJC5GQ8N7S2 189 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 LMLNQ96KR4 655 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 RPL10LQ96L21 214 aaKnown RBP18.32■□□□□ 0.52
CCDC43-201ENST00000315286 TNKS2Q9H2K2 1166 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 MAGEE1Q9HCI5 957 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 IL17CQ9P0M4 197 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 FAM50BQ9Y247 325 aa18.32■□□□□ 0.52
CCDC43-201ENST00000315286 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.32■□□□□ 0.52
CCDC43-201ENST00000315286 NOTCH4Q99466 2003 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 TMEM233B4DJY2 109 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 CHUKO15111 745 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 CYBBP04839 570 aa18.31■□□□□ 0.52
CCDC43-201ENST00000315286 JUNP05412 331 aaKnown RBP18.31■□□□□ 0.52
CCDC43-201ENST00000315286 EN2P19622 333 aaPredicted RBP18.31■□□□□ 0.52
CCDC43-201ENST00000315286 EPHA3P29320 983 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms