RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 EPB41L5Q9HCM4 733 aa19.5■□□□□ 0.71
LIME1-201ENST00000309546 ABHD10Q9NUJ1 306 aa19.5■□□□□ 0.71
LIME1-201ENST00000309546 SPTLC3Q9NUV7 552 aa19.5■□□□□ 0.71
LIME1-201ENST00000309546 CCDC187A0A096LP49 1063 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 LRRD1A4D1F6 860 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 D6RAR5 112 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 NTN3O00634 580 aaPredicted RBP19.49■□□□□ 0.71
LIME1-201ENST00000309546 HLA-DQB2P05538 268 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 CCNB1P14635 433 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 MX2P20592 715 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 CCNCP24863 283 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 MAN1A1P33908 653 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 GPR1P46091 355 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 C14orf28Q4W4Y0 310 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 RFLNAQ6ZTI6 216 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 B3GNT8Q7Z7M8 397 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 VSTM4Q8IW00 320 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 OR6C4Q8NGE1 309 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 WDR36Q8NI36 951 aaKnown RBP19.49■□□□□ 0.71
LIME1-201ENST00000309546 KCNE4Q8WWG9 221 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 RAPGEF5Q92565 580 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 HIC2Q96JB3 615 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 BBC3Q96PG8 261 aaPredicted RBP19.49■□□□□ 0.71
LIME1-201ENST00000309546 CHP1Q99653 195 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 FOXP3Q9BZS1 431 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 LRRN3Q9H3W5 708 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 PRORYQ9H606 182 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 CHKBQ9Y259 395 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 PPIL1Q9Y3C6 166 aa19.49■□□□□ 0.71
LIME1-201ENST00000309546 A0A0J9YYE9 177 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 A0A1W2PQM1 296 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 EIF4E1BA6NMX2 242 aaKnown RBP19.48■□□□□ 0.71
LIME1-201ENST00000309546 FZD6O60353 706 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 NOBOXO60393 691 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 MFAP3LO75121 409 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 TRBC1P01850 177 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 CEACAM5P06731 702 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 CA4P22748 312 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 KDELR1P24390 212 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 CXADRP78310 365 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 ILF3Q12906 894 aaKnown RBP eCLIP19.48■□□□□ 0.71
LIME1-201ENST00000309546 ALG1LQ6GMV1 187 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 CCNJLQ8IV13 435 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 CCDC13Q8IYE1 715 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 CBARPQ8N350 705 aaPredicted RBP19.48■□□□□ 0.71
LIME1-201ENST00000309546 LPCAT1Q8NF37 534 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 SLC35G2Q8TBE7 412 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 KIAA1524Q8TCG1 905 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.48■□□□□ 0.71
LIME1-201ENST00000309546 AP2M1Q96CW1 435 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 HDAC11Q96DB2 347 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 CCDC42Q96M95 316 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 TSGA13Q96PP4 275 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 TDRD1Q9BXT4 1180 aaKnown RBP19.48■□□□□ 0.71
LIME1-201ENST00000309546 GSDMCQ9BYG8 508 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 FRMD8Q9BZ67 464 aaPredicted RBP19.48■□□□□ 0.71
LIME1-201ENST00000309546 SUFUQ9UMX1 484 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 PCDHGA8Q9Y5G5 932 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 PTPRQQ9UMZ3 2332 aa19.48■□□□□ 0.71
LIME1-201ENST00000309546 UNC13CQ8NB66 2214 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 CAPN8A6NHC0 703 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 TNFSF15O95150 251 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 GLB1P16278 677 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 POLD2P49005 469 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 NIPAL4Q0D2K0 466 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 SLC10A2Q12908 348 aaPredicted RBP19.47■□□□□ 0.71
LIME1-201ENST00000309546 IHHQ14623 411 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 CERCAMQ5T4B2 595 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 BROXQ5VW32 411 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 IGF2-ASQ6U949 168 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 TECPR1Q7Z6L1 1165 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 ARL14Q8N4G2 192 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 PTCD2Q8WV60 388 aaKnown RBP19.47■□□□□ 0.71
LIME1-201ENST00000309546 PRR11Q96HE9 360 aaPredicted RBP19.47■□□□□ 0.71
LIME1-201ENST00000309546 SLC46A1Q96NT5 459 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 RNF157Q96PX1 679 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 UBL7Q96S82 380 aaPredicted RBP19.47■□□□□ 0.71
LIME1-201ENST00000309546 ABCG8Q9H221 673 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 NHEJ1Q9H9Q4 299 aaPredicted RBP19.47■□□□□ 0.71
LIME1-201ENST00000309546 DTLQ9NZJ0 730 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 LRIT1Q9P2V4 623 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 AMACRQ9UHK6 382 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 ATXN7L1Q9ULK2 861 aaPredicted RBP19.47■□□□□ 0.71
LIME1-201ENST00000309546 HEY1Q9Y5J3 304 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 RNF215Q9Y6U7 377 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 LOC400499M0QZD8 3231 aa19.47■□□□□ 0.71
LIME1-201ENST00000309546 AGRPO00253 132 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 KLK10O43240 276 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 KRT1P04264 644 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 ZNF30P17039 623 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 CES1P23141 567 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 AK4P27144 223 aaPredicted RBP19.46■□□□□ 0.71
LIME1-201ENST00000309546 TEAD1P28347 426 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 INHBCP55103 352 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 MAZP56270 477 aaKnown RBP19.46■□□□□ 0.71
LIME1-201ENST00000309546 HLTFQ14527 1009 aaKnown RBP eCLIP19.46■□□□□ 0.71
LIME1-201ENST00000309546 OGFOD3Q6PK18 319 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 SLC30A9Q6PML9 568 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 GPR155Q7Z3F1 870 aa19.46■□□□□ 0.71
LIME1-201ENST00000309546 TRIM74Q86UV6 250 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms