RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 GOLGA6AQ9NYA3 693 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 TAF4O00268 1085 aa26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 ZRANB2O95218 330 aaKnown RBP eCLIP26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 PRLP01236 227 aa26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 MMP2P08253 660 aa26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 TGM2P21980 687 aa26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 SKOR1P84550 965 aa26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 PTSQ03393 145 aa26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 TFDP3Q5H9I0 405 aa26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 CDCP2Q5VXM1 449 aa26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 RCOR2Q8IZ40 523 aa26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 RBM41Q96IZ5 413 aaKnown RBP26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 DEPDC7Q96QD5 511 aa26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 CYP4F12Q9HCS2 524 aa26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 MRPL40Q9NQ50 206 aaKnown RBP26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 SEPT10Q9P0V9 454 aa26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 CACNA1BQ00975 2339 aa26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 DMXL2Q8TDJ6 3036 aa26.4■■□□□ 1.82
CDKN2A-201ENST00000304494 LRP4O75096 1905 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 PRSS38A1L453 326 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 CST8O60676 142 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 PYGLP06737 847 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 CDK3Q00526 305 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 KAZNQ674X7 775 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 NYAP1Q6ZVC0 841 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 ZNF765Q7L2R6 523 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 NT5DC3Q86UY8 548 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 NRSN1Q8IZ57 195 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 AGAP3Q96P47 875 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 LYSMD1Q96S90 227 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 MOSPD1Q9UJG1 213 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 PADI4Q9UM07 663 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 GPR34Q9UPC5 381 aa26.39■■□□□ 1.82
CDKN2A-201ENST00000304494 GPR1P46091 355 aa26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 STC1P52823 247 aa26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 TCEA2Q15560 299 aa26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 KCTD16Q68DU8 428 aa26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 NLRP8Q86W28 1048 aa26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 CCDC50Q8IVM0 306 aa26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 EXD1Q8NHP7 514 aa26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 TFB1MQ8WVM0 346 aaKnown RBP26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 P3H4Q92791 437 aa26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 AP2M1Q96CW1 435 aa26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 IMP4Q96G21 291 aaKnown RBP26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 SMIM14Q96QK8 99 aa26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 MLPHQ9BV36 600 aaPredicted RBP26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 CEP41Q9BYV8 373 aa26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 ABCG8Q9H221 673 aa26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 SIRPGQ9P1W8 387 aa26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 GULP1Q9UBP9 304 aa26.38■■□□□ 1.81
CDKN2A-201ENST00000304494 ZZEF1O43149 2961 aa26.37■■□□□ 1.81
CDKN2A-201ENST00000304494 A0A0U1RQS6 177 aa26.37■■□□□ 1.81
CDKN2A-201ENST00000304494 BTNL10A8MVZ5 291 aa26.37■■□□□ 1.81
CDKN2A-201ENST00000304494 ANKRD66B4E2M5 251 aa26.37■■□□□ 1.81
CDKN2A-201ENST00000304494 RTP5Q14D33 572 aa26.37■■□□□ 1.81
CDKN2A-201ENST00000304494 PRKD1Q15139 912 aaPredicted RBP26.37■■□□□ 1.81
CDKN2A-201ENST00000304494 ADAMTSL4Q6UY14 1074 aa26.37■■□□□ 1.81
CDKN2A-201ENST00000304494 TAF8Q7Z7C8 310 aa26.37■■□□□ 1.81
CDKN2A-201ENST00000304494 WDR48Q8TAF3 677 aa26.37■■□□□ 1.81
CDKN2A-201ENST00000304494 FRMD8Q9BZ67 464 aaPredicted RBP26.37■■□□□ 1.81
CDKN2A-201ENST00000304494 SLC25A51Q9H1U9 297 aa26.37■■□□□ 1.81
CDKN2A-201ENST00000304494 CD84Q9UIB8 345 aa26.37■■□□□ 1.81
CDKN2A-201ENST00000304494 AK5Q9Y6K8 562 aa26.37■■□□□ 1.81
CDKN2A-201ENST00000304494 ZFHX4Q86UP3 3567 aa26.37■■□□□ 1.81
CDKN2A-201ENST00000304494 hCG_1818297A0A087WSY0 165 aa26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 MTSS1O43312 755 aa26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 NAP1L1P55209 391 aaKnown RBP26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 SLC14A2Q15849 920 aa26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 QPCTQ16769 361 aa26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 TEX44Q53QW1 395 aa26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 RAD9BQ6WBX8 426 aa26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 KYQ8NBH2 561 aa26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 OR6C4Q8NGE1 309 aa26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 CCHCR1Q8TD31 782 aa26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 BAG1Q99933 345 aaPredicted RBP26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 TMEM168Q9H0V1 697 aa26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 CARS2Q9HA77 564 aaKnown RBP26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 IMPACTQ9P2X3 320 aa26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 SAE1Q9UBE0 346 aaPredicted RBP26.36■■□□□ 1.81
CDKN2A-201ENST00000304494 C1orf232A0A0U1RR37 186 aa26.35■■□□□ 1.81
CDKN2A-201ENST00000304494 RCCD1A6NED2 376 aa26.35■■□□□ 1.81
CDKN2A-201ENST00000304494 CLDN7O95471 211 aa26.35■■□□□ 1.81
CDKN2A-201ENST00000304494 CEACAM5P06731 702 aa26.35■■□□□ 1.81
CDKN2A-201ENST00000304494 PECAM1P16284 738 aaPredicted RBP26.35■■□□□ 1.81
CDKN2A-201ENST00000304494 PPP2R5EQ16537 467 aa26.35■■□□□ 1.81
CDKN2A-201ENST00000304494 PERM1Q5SV97 790 aa26.35■■□□□ 1.81
CDKN2A-201ENST00000304494 RFLNAQ6ZTI6 216 aa26.35■■□□□ 1.81
CDKN2A-201ENST00000304494 SCAMP4Q969E2 229 aa26.35■■□□□ 1.81
CDKN2A-201ENST00000304494 GOLGA4Q13439 2230 aaKnown RBP26.35■■□□□ 1.81
CDKN2A-201ENST00000304494 CSO75390 466 aaKnown RBP26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 TCEA3O75764 348 aa26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 SOD1P00441 154 aa26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 CDC25BP30305 580 aa26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 CTNNA1P35221 906 aaKnown RBP26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 MARCKSL1P49006 195 aa26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 COPS2P61201 443 aa26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 LLGL1Q15334 1064 aa26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 B4GALNT4Q76KP1 1039 aa26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 FAM46DQ8NEK8 389 aa26.34■■□□□ 1.81
CDKN2A-201ENST00000304494 KRT35Q92764 455 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms