RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 GPC1P35052 558 aa10.18□□□□□ -0.78
GABRB3-201ENST00000299267 SLC1A2P43004 574 aa10.18□□□□□ -0.78
GABRB3-201ENST00000299267 RPL14P50914 215 aaKnown RBP10.18□□□□□ -0.78
GABRB3-201ENST00000299267 CCNHP51946 323 aaPredicted RBP10.18□□□□□ -0.78
GABRB3-201ENST00000299267 AP2B1P63010 937 aa10.18□□□□□ -0.78
GABRB3-201ENST00000299267 SKOR1P84550 965 aa10.18□□□□□ -0.78
GABRB3-201ENST00000299267 CYLC2Q14093 348 aaPredicted RBP10.18□□□□□ -0.78
GABRB3-201ENST00000299267 SIRPB2Q5JXA9 342 aa10.18□□□□□ -0.78
GABRB3-201ENST00000299267 MSANTD2Q6P1R3 559 aa10.18□□□□□ -0.78
GABRB3-201ENST00000299267 CPNE9Q8IYJ1 553 aa10.18□□□□□ -0.78
GABRB3-201ENST00000299267 CMTR2Q8IYT2 770 aaKnown RBP10.18□□□□□ -0.78
GABRB3-201ENST00000299267 BRSK1Q8TDC3 778 aa10.18□□□□□ -0.78
GABRB3-201ENST00000299267 STYXQ8WUJ0 223 aa10.18□□□□□ -0.78
GABRB3-201ENST00000299267 SYT11Q9BT88 431 aa10.18□□□□□ -0.78
GABRB3-201ENST00000299267 MTG2Q9H4K7 406 aa10.18□□□□□ -0.78
GABRB3-201ENST00000299267 Q9H521 79 aa10.18□□□□□ -0.78
GABRB3-201ENST00000299267 ANLNQ9NQW6 1124 aa10.18□□□□□ -0.78
GABRB3-201ENST00000299267 POLR3BQ9NW08 1133 aaPredicted RBP10.18□□□□□ -0.78
GABRB3-201ENST00000299267 NOP53Q9NZM5 478 aaKnown RBP10.18□□□□□ -0.78
GABRB3-201ENST00000299267 CXXC1Q9P0U4 656 aaPredicted RBP10.18□□□□□ -0.78
GABRB3-201ENST00000299267 SOX13Q9UN79 622 aa10.18□□□□□ -0.78
GABRB3-201ENST00000299267 PDE5AO76074 875 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 ADH5P11766 374 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 GALNT2Q10471 571 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 NFYCQ13952 458 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 SPDYCQ5MJ68 293 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 ACBD5Q5T8D3 534 aaPredicted RBP10.17□□□□□ -0.78
GABRB3-201ENST00000299267 TRNP1Q6NT89 227 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 VITQ6UXI7 678 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 SNX32Q86XE0 403 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 SELENOMQ8WWX9 145 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 ZNF778Q96MU6 729 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 C1orf50Q9BV19 199 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 TRMT61BQ9BVS5 477 aaKnown RBP10.17□□□□□ -0.78
GABRB3-201ENST00000299267 MYLK2Q9H1R3 596 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 EFCAB1Q9HAE3 211 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 USP29Q9HBJ7 922 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 VPS51Q9UID3 782 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 TIMM22Q9Y584 194 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 HIDE1A8MVS5 230 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 CASQ2O14958 399 aaPredicted RBP10.17□□□□□ -0.78
GABRB3-201ENST00000299267 FFAR2O15552 330 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 NDUFS2O75306 463 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 GRK3P35626 688 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 PHEXP78562 749 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 STX5Q13190 355 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 PAFAH1B3Q15102 231 aaKnown RBP10.17□□□□□ -0.78
GABRB3-201ENST00000299267 PDK4Q16654 411 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 DNAL1Q4LDG9 190 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 ATP6AP1LQ52LC2 224 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 VWA5B1Q5TIE3 1220 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 FAM171BQ6P995 826 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 ALKAL1Q6UXT8 129 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 AGGF1Q8N302 714 aaeCLIP10.17□□□□□ -0.78
GABRB3-201ENST00000299267 LINC01465Q8N7H1 131 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 GSTCDQ8NEC7 633 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 GPR156Q8NFN8 814 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 ACDQ96AP0 544 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 CACNA2D2Q9NY47 1150 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 GVINP1Q7Z2Y8 2422 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 A0A087X1B8 175 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.17□□□□□ -0.78
GABRB3-201ENST00000299267 MYO1GB0I1T2 1018 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 C9JVG2 144 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 ALDH1A2O94788 518 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 EEF1DP29692 281 aaKnown RBP10.17□□□□□ -0.78
GABRB3-201ENST00000299267 HTR7P34969 479 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 GMPRP36959 345 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 CDK7P50613 346 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 GPX6P59796 221 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 TRIP10Q15642 601 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 TCHHL1Q5QJ38 904 aaPredicted RBP10.17□□□□□ -0.78
GABRB3-201ENST00000299267 ADGRD1Q6QNK2 874 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 METTL3Q86U44 580 aaKnown RBP10.17□□□□□ -0.78
GABRB3-201ENST00000299267 TMEM25Q86YD3 366 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 CFAP206Q8IYR0 622 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 SLC39A11Q8N1S5 342 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 PCDH20Q8N6Y1 951 aaKnown RBP10.17□□□□□ -0.78
GABRB3-201ENST00000299267 VPS37AQ8NEZ2 397 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 CEP70Q8NHQ1 597 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 ATXN2LQ8WWM7 1075 aaKnown RBP10.17□□□□□ -0.78
GABRB3-201ENST00000299267 GBP5Q96PP8 586 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 ASPSCR1Q9BZE9 553 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 RHBGQ9H310 441 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 SUV39H2Q9H5I1 410 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 ANKRD6Q9Y2G4 727 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 PSAT1Q9Y617 370 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 A0A1W2PQ67 120 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 CYP11A1P05108 521 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 LINC00032P0C843 101 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 THRAP10827 490 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 CES1P23141 567 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 SKIV2L2P42285 1042 aaKnown RBP10.17□□□□□ -0.78
GABRB3-201ENST00000299267 AP1S1P61966 158 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 NAB1Q13506 487 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 FLOT2Q14254 428 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 AP5B1Q2VPB7 878 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 EFL1Q7Z2Z2 1120 aaKnown RBP10.17□□□□□ -0.78
GABRB3-201ENST00000299267 OR10G6Q8NH81 332 aa10.17□□□□□ -0.78
GABRB3-201ENST00000299267 HMGB4Q8WW32 186 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms