RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 XKRYO14609 159 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 CDH5P33151 784 aaPredicted RBP14.28□□□□□ -0.12
CUX2-201ENST00000261726 FSTL1Q12841 308 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 PTGES3Q15185 160 aaKnown RBP14.28□□□□□ -0.12
CUX2-201ENST00000261726 ATP13A4Q4VNC1 1196 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 MTX3Q5HYI7 312 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 HPS1Q92902 700 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 EHD4Q9H223 541 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 ADAM28Q9UKQ2 775 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 SALL1Q9NSC2 1324 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 LYPLA1O75608 230 aaPredicted RBP14.28□□□□□ -0.12
CUX2-201ENST00000261726 ATXN1P54253 815 aaKnown RBP14.28□□□□□ -0.12
CUX2-201ENST00000261726 CXCL17Q6UXB2 119 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 UBE2R2Q712K3 238 aaPredicted RBP14.28□□□□□ -0.12
CUX2-201ENST00000261726 PHF24Q9UPV7 400 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 NEDD8-MDP1E9PL57 170 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 CACNB4O00305 520 aaPredicted RBP14.28□□□□□ -0.12
CUX2-201ENST00000261726 PDE2AO00408 941 aaPredicted RBP14.28□□□□□ -0.12
CUX2-201ENST00000261726 LCA5LO95447 670 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 CHKAP35790 457 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 SSR2P43308 183 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 RTL4Q6ZR62 310 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 DHDDSQ86SQ9 333 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 RAVER1Q8IY67 606 aaKnown RBP14.28□□□□□ -0.12
CUX2-201ENST00000261726 SFRP1Q8N474 314 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 ART5Q96L15 291 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 MST1RQ04912 1400 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 NR2F6P10588 404 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 FOLH1Q04609 750 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 KIAA0319LQ8IZA0 1049 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 CADM2Q8N3J6 435 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 AGAP11Q8TF27 550 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 TLR10Q9BXR5 811 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 TPK1Q9H3S4 243 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 RSL24D1Q9UHA3 163 aaKnown RBP14.28□□□□□ -0.12
CUX2-201ENST00000261726 PCP4L1A6NKN8 68 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 PAPSS1O43252 624 aaPredicted RBP14.28□□□□□ -0.12
CUX2-201ENST00000261726 LIASO43766 372 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 DNTTP04053 509 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 NDUFV1P49821 464 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 ZNF135P52742 658 aaPredicted RBP14.28□□□□□ -0.12
CUX2-201ENST00000261726 ADCY4Q8NFM4 1077 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 AENQ8WTP8 325 aaKnown RBP14.28□□□□□ -0.12
CUX2-201ENST00000261726 CKAP2Q8WWK9 683 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 COPS5Q92905 334 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 KCNS3Q9BQ31 491 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 C3orf14Q9HBI5 128 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 AGO1Q9UL18 857 aaKnown RBP14.28□□□□□ -0.12
CUX2-201ENST00000261726 EML1O00423 815 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 TTKP33981 857 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 BNIP2Q12982 314 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 SF1Q15637 639 aaKnown RBP14.27□□□□□ -0.12
CUX2-201ENST00000261726 LIPMQ5VYY2 423 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 ZNF613Q6PF04 617 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 OR4L1Q8NH43 312 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 S100ZQ8WXG8 99 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 MECRQ9BV79 373 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 TDRD1Q9BXT4 1180 aaKnown RBP14.27□□□□□ -0.12
CUX2-201ENST00000261726 CIDEBQ9UHD4 219 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 ADGRE2Q9UHX3 823 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 MGAT4AQ9UM21 535 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 PLIN3O60664 434 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 CTSKP43235 329 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 TARBP2Q15633 366 aaKnown RBP14.27□□□□□ -0.12
CUX2-201ENST00000261726 SNX20Q7Z614 316 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 PEX5LQ8IYB4 626 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 DNASE1L2Q92874 299 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 TEFMQ96QE5 360 aaKnown RBP14.27□□□□□ -0.12
CUX2-201ENST00000261726 RNPEPL1Q9HAU8 725 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 ST3GAL5Q9UNP4 418 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 KCNE2Q9Y6J6 123 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 PXDNLA1KZ92 1463 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 NRP2O60462 931 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 ETS2P15036 469 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 CDK9P50750 372 aaKnown RBP14.27□□□□□ -0.12
CUX2-201ENST00000261726 ACTR3P61158 418 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 CXCL9Q07325 125 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 TTMPQ5BVD1 217 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 TXNDC11Q6PKC3 985 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 HJURPQ8NCD3 748 aaPredicted RBP14.27□□□□□ -0.12
CUX2-201ENST00000261726 HTRA1Q92743 480 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 HDAC10Q969S8 669 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 UROC1Q96N76 676 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 XPR1Q9UBH6 696 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 GGA2Q9UJY4 613 aa14.27□□□□□ -0.12
CUX2-201ENST00000261726 AZIN1O14977 448 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 LRIG2O94898 1065 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 AP2A2O94973 939 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 LPOP22079 712 aaPredicted RBP14.27□□□□□ -0.13
CUX2-201ENST00000261726 ITGB3BPQ13352 177 aaPredicted RBP14.27□□□□□ -0.13
CUX2-201ENST00000261726 FAM46CQ5VWP2 391 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 TMPRSS11BQ86T26 416 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 ADAMTSL2Q86TH1 951 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 ALLCQ8N6M5 410 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 KAT2AQ92830 837 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 PMEPA1Q969W9 287 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 GPN1Q9HCN4 374 aaPredicted RBP14.27□□□□□ -0.13
CUX2-201ENST00000261726 MRTO4Q9UKD2 239 aaKnown RBP14.27□□□□□ -0.13
CUX2-201ENST00000261726 PCDHGC5Q9Y5F6 944 aa14.27□□□□□ -0.13
CUX2-201ENST00000261726 FRMPD4Q14CM0 1322 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms