RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 INHBAP08476 426 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 ADRB3P13945 408 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 OGNP20774 298 aaKnown RBP12.93□□□□□ -0.34
LSM8-201ENST00000249299 ARNTP27540 789 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 PPARGP37231 505 aaPredicted RBP12.93□□□□□ -0.34
LSM8-201ENST00000249299 MSH2P43246 934 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 RPS9P46781 194 aaKnown RBP12.93□□□□□ -0.34
LSM8-201ENST00000249299 POLD2P49005 469 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 STC1P52823 247 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 CSE1LP55060 971 aaKnown RBP12.93□□□□□ -0.34
LSM8-201ENST00000249299 RPS14P62263 151 aaKnown RBP12.93□□□□□ -0.34
LSM8-201ENST00000249299 CRY1Q16526 586 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 TTC31Q49AM3 519 aaPredicted RBP12.93□□□□□ -0.34
LSM8-201ENST00000249299 TMEM52BQ4KMG9 183 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 CEP85LQ5SZL2 805 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 TEDDM1Q5T9Z0 273 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 DMRTA1Q5VZB9 504 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 NEPROQ6NW34 567 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 NEK5Q6P3R8 708 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 TRMT10BQ6PF06 316 aaKnown RBP12.93□□□□□ -0.34
LSM8-201ENST00000249299 CERS6Q6ZMG9 384 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 TAOK1Q7L7X3 1001 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 LYSMD3Q7Z3D4 306 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 MMAAQ8IVH4 418 aaKnown RBP12.93□□□□□ -0.34
LSM8-201ENST00000249299 OR4K2Q8NGD2 314 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 OR4L1Q8NH43 312 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 RPLP0P6Q8NHW5 317 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 HDAC10Q969S8 669 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 CLDN23Q96B33 292 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 MTBPQ96DY7 904 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 DNAJC1Q96KC8 554 aaKnown RBP12.93□□□□□ -0.34
LSM8-201ENST00000249299 POLMQ9NP87 494 aaPredicted RBP12.93□□□□□ -0.34
LSM8-201ENST00000249299 EURLQ9NYK6 297 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 PKD2L2Q9NZM6 624 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 TXNDC16Q9P2K2 825 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 PSMC3IPQ9P2W1 217 aaPredicted RBP12.93□□□□□ -0.34
LSM8-201ENST00000249299 B4GALT6Q9UBX8 382 aa12.93□□□□□ -0.34
LSM8-201ENST00000249299 CORO1CQ9ULV4 474 aaPredicted RBP12.93□□□□□ -0.34
LSM8-201ENST00000249299 KRT37O76014 449 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 KRT38O76015 456 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 DNTTP04053 509 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 ALPIP09923 528 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 PIRTP0C851 137 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 CTPS1P17812 591 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 TARSP26639 723 aaKnown RBP12.92□□□□□ -0.34
LSM8-201ENST00000249299 GP5P40197 560 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 P2RY2P41231 377 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 PTSQ03393 145 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 FZD5Q13467 585 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 AGERQ15109 404 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 KRT71Q3SY84 523 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 GPR33Q49SQ1 333 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 HSP90B2PQ58FF3 399 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 HSP90AA5PQ58FG0 334 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 TNFAIP8L3Q5GJ75 292 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 RNF187Q5TA31 235 aaPredicted RBP12.92□□□□□ -0.34
LSM8-201ENST00000249299 GRTP1Q5TC63 336 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 LYPLAL1Q5VWZ2 237 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 ZNF765Q7L2R6 523 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 SDCCAG8Q86SQ7 713 aaPredicted RBP12.92□□□□□ -0.34
LSM8-201ENST00000249299 TMPRSS6Q8IU80 811 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.92□□□□□ -0.34
LSM8-201ENST00000249299 PBXIP1Q96AQ6 731 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 ARRDC3Q96B67 414 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 KCNK17Q96T54 332 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 PAFAH2Q99487 392 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 TTC1Q99614 292 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 LMAN1LQ9HAT1 526 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 PPANQ9NQ55 473 aaKnown RBP12.92□□□□□ -0.34
LSM8-201ENST00000249299 SENP1Q9P0U3 644 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 SLC2A6Q9UGQ3 507 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 CA14Q9ULX7 337 aa12.92□□□□□ -0.34
LSM8-201ENST00000249299 IQANK1A0A1B0GTG1 560 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 FAM170BA6NMN3 283 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 AGAP14A8MT82 685 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 GOLGA8KD6RF30 607 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 ARHGAP33O14559 1287 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 AURKAO14965 403 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 CLDN7O95471 211 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 IGLV3-19P01714 112 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 ERVK-10P10266 1014 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 LHCGRP22888 699 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 SPRP35270 261 aaPredicted RBP12.91□□□□□ -0.34
LSM8-201ENST00000249299 DRD3P35462 400 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 SPAM1P38567 509 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 WASP42768 502 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 PSMD8P48556 350 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 SPINT3P49223 89 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 FAM193AP78312 1265 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 CACNG1Q06432 222 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 MAP7D1Q3KQU3 841 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 UBAP2Q5T6F2 1119 aaKnown RBP12.91□□□□□ -0.34
LSM8-201ENST00000249299 PIP5KL1Q5T9C9 394 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 AGBL2Q5U5Z8 902 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 LRRC66Q68CR7 880 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 KIAA1211LQ6NV74 962 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 CES3Q6UWW8 571 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 CAPN12Q6ZSI9 719 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 RASSF3Q86WH2 238 aa12.91□□□□□ -0.34
LSM8-201ENST00000249299 CILP2Q8IUL8 1156 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms