RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 NRSN1Q8IZ57 195 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 RBFAQ8N0V3 343 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 TTC13Q8NBP0 860 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 OR56A4Q8NGH8 313 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 FUBP1Q96AE4 644 aaKnown RBP12.76□□□□□ -0.37
VPREB3-201ENST00000248948 PDXPQ96GD0 296 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 ALS2CR12Q96Q35 445 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 FCRL5Q96RD9 977 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 SRPK1Q96SB4 655 aaKnown RBP12.76□□□□□ -0.37
VPREB3-201ENST00000248948 MLPHQ9BV36 600 aaPredicted RBP12.76□□□□□ -0.37
VPREB3-201ENST00000248948 SCNM1Q9BWG6 230 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 HEMGNQ9BXL5 484 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 TEX101Q9BY14 249 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 PHPT1Q9NRX4 125 aaPredicted RBP12.76□□□□□ -0.37
VPREB3-201ENST00000248948 NFKBIL1Q9UBC1 381 aaPredicted RBP12.76□□□□□ -0.37
VPREB3-201ENST00000248948 PNMA8BQ9ULN7 279 aaPredicted RBP12.76□□□□□ -0.37
VPREB3-201ENST00000248948 MYLKQ15746 1914 aa12.76□□□□□ -0.37
VPREB3-201ENST00000248948 TPRP12270 2363 aaKnown RBP12.76□□□□□ -0.37
VPREB3-201ENST00000248948 AKAP13Q12802 2813 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 C1orf232A0A0U1RR37 186 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 RGSL1A5PLK6 1076 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 LMO7DNF2Z398 122 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 H7C0C1 242 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 K7ESM1 405 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 TNFRSF10CO14798 259 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 STK10O94804 968 aaKnown RBP12.75□□□□□ -0.37
VPREB3-201ENST00000248948 NDST3O95803 873 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 CKMT1AP12532 417 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 NFKB1P19838 968 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 CD68P34810 354 aaPredicted RBP12.75□□□□□ -0.37
VPREB3-201ENST00000248948 MAP1BP46821 2468 aaKnown RBP12.75□□□□□ -0.37
VPREB3-201ENST00000248948 ATP5OP48047 213 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 DCDC1P59894 354 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 DAB2P98082 770 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 CDK3Q00526 305 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 CDK18Q07002 472 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 KLF1Q13351 362 aaPredicted RBP12.75□□□□□ -0.37
VPREB3-201ENST00000248948 GALNT3Q14435 633 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 PRRT3Q5FWE3 981 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 DENND2CQ68D51 928 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 RAET1GQ6H3X3 334 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 ENPP7Q6UWV6 458 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 ADAMTSL4Q6UY14 1074 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 Q6ZVL8 140 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 ZNF567Q8N184 647 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 GALNT15Q8N3T1 639 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 CCHCR1Q8TD31 782 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 LMX1AQ8TE12 382 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 AP2M1Q96CW1 435 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 PPP1R2P1Q96PQ5 205 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 CDH19Q9H159 772 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 GBA3Q9H227 469 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 MAGEE1Q9HCI5 957 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 FGF22Q9HCT0 170 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 PKD2L2Q9NZM6 624 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 FAM153AQ9UHL3 310 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 PACSIN2Q9UNF0 486 aaPredicted RBP12.75□□□□□ -0.37
VPREB3-201ENST00000248948 MSRB2Q9Y3D2 182 aa12.75□□□□□ -0.37
VPREB3-201ENST00000248948 GOLGA6L3A6NEY3 463 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 MT-CYBP00156 380 aaPredicted RBP12.74□□□□□ -0.37
VPREB3-201ENST00000248948 SOD1P00441 154 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 EPOP01588 193 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 PTMAP06454 111 aaKnown RBP12.74□□□□□ -0.37
VPREB3-201ENST00000248948 GP1BAP07359 652 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 RBP3P10745 1247 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 RBL1P28749 1068 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 TNNT3P45378 269 aaPredicted RBP12.74□□□□□ -0.37
VPREB3-201ENST00000248948 EIF3EP60228 445 aaKnown RBP12.74□□□□□ -0.37
VPREB3-201ENST00000248948 SRP54P61011 504 aaKnown RBP12.74□□□□□ -0.37
VPREB3-201ENST00000248948 PTSQ03393 145 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 DNAJC3Q13217 504 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 MPP3Q13368 585 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 PTPRRQ15256 657 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 ELOCQ15369 112 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 SMAD1Q15797 465 aaKnown RBP12.74□□□□□ -0.37
VPREB3-201ENST00000248948 PCSK7Q16549 785 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 CDKN3Q16667 212 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 C6orf132Q5T0Z8 1188 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 FAXCQ5TGI0 409 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 LVRNQ6Q4G3 990 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 KDELC1Q6UW63 502 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 B4GALNT4Q76KP1 1039 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 PELI3Q8N2H9 469 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 CHCHD4Q8N4Q1 142 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 PNPLA1Q8N8W4 532 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 SPATA22Q8NHS9 363 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 APOLD1Q96LR9 279 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 BOCQ9BWV1 1114 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 TCEAL2Q9H3H9 227 aaPredicted RBP12.74□□□□□ -0.37
VPREB3-201ENST00000248948 RAD18Q9NS91 495 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 RSPH14Q9UHP6 348 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 KLK13Q9UKR3 277 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 GUCA1BQ9UMX6 200 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 ZNF711Q9Y462 761 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 IGF2RP11717 2491 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 ASPMQ8IZT6 3477 aa12.74□□□□□ -0.37
VPREB3-201ENST00000248948 ARHGEF17Q96PE2 2063 aaPredicted RBP12.73□□□□□ -0.37
VPREB3-201ENST00000248948 LY6G6EA0A0G2JKS1 128 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 LOC285095A0A1B0GVY8 99 aa12.73□□□□□ -0.37
VPREB3-201ENST00000248948 PRSS38A1L453 326 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms