RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 CYS1Q717R9 158 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 TAMM41Q96BW9 452 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 TNIP3Q96KP6 325 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 PPP1R10Q96QC0 940 aaKnown RBP16.75■□□□□ 0.27
CTDP1-201ENST00000075430 ANKRD60Q9BZ19 345 aa16.75■□□□□ 0.27
CTDP1-201ENST00000075430 INTS7Q9NVH2 962 aaKnown RBP16.75■□□□□ 0.27
CTDP1-201ENST00000075430 KATNA1O75449 491 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 TAF6P49848 677 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 BCAP31P51572 246 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 SH3BP2P78314 561 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 LIPEQ05469 1076 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 MEP1AQ16819 746 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 PPP4R4Q6NUP7 873 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 CPSF7Q8N684 471 aaKnown RBP16.74■□□□□ 0.27
CTDP1-201ENST00000075430 SCAMP5Q8TAC9 235 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 LZICQ8WZA0 190 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 TEX37Q96LM6 180 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 MAP10Q9P2G4 905 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 IGKV6-21A0A0C4DH24 114 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 A6NL46 340 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 LDLRP01130 860 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 CD86P42081 329 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 ACADSBP45954 432 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 PAGE2BQ5JRK9 111 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 CLEC20AQ6ZU45 233 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 CENPIQ92674 756 aaPredicted RBP16.74■□□□□ 0.27
CTDP1-201ENST00000075430 HTRA1Q92743 480 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 HEPHQ9BQS7 1158 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 EIF2B3Q9NR50 452 aaKnown RBP16.74■□□□□ 0.27
CTDP1-201ENST00000075430 TMEM30AQ9NV96 361 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 MARCH4Q9P2E8 410 aaPredicted RBP16.74■□□□□ 0.27
CTDP1-201ENST00000075430 ZFC3H1O60293 1989 aaKnown RBP16.74■□□□□ 0.27
CTDP1-201ENST00000075430 A0A0G2JLL6 359 aaPredicted RBP16.74■□□□□ 0.27
CTDP1-201ENST00000075430 LTA4HP09960 611 aaKnown RBP16.74■□□□□ 0.27
CTDP1-201ENST00000075430 PRDX3P30048 256 aaKnown RBP16.74■□□□□ 0.27
CTDP1-201ENST00000075430 MLLT10P55197 1068 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 TNK2Q07912 1038 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 SFSWAPQ12872 951 aaKnown RBP16.74■□□□□ 0.27
CTDP1-201ENST00000075430 PYCR3Q53H96 274 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 PRRT2Q7Z6L0 340 aaPredicted RBP16.74■□□□□ 0.27
CTDP1-201ENST00000075430 CROCCP3Q8IVE0 287 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 LZTR1Q8N653 840 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 LPPQ93052 612 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 NCLNQ969V3 563 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 TBATAQ96M53 351 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 C9orf16Q9BUW7 83 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 RGS18Q9NS28 235 aa16.74■□□□□ 0.27
CTDP1-201ENST00000075430 FSHRP23945 695 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 GSK3BP49841 420 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 SEPHS1P49903 392 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 ARSDP51689 593 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 HECTD2Q5U5R9 776 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 GALNT5Q7Z7M9 940 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 ITIH5Q86UX2 942 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 TWIST2Q8WVJ9 160 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 GLMNQ92990 594 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 GFM2Q969S9 779 aaKnown RBP16.73■□□□□ 0.27
CTDP1-201ENST00000075430 ZNF419Q96HQ0 510 aaPredicted RBP16.73■□□□□ 0.27
CTDP1-201ENST00000075430 GPR78Q96P69 363 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 NPY6RQ99463 290 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 CHID1Q9BWS9 393 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 VPS45Q9NRW7 570 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 SMPD3Q9NY59 655 aaPredicted RBP16.73■□□□□ 0.27
CTDP1-201ENST00000075430 ANKRD6Q9Y2G4 727 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 DNAJC15Q9Y5T4 150 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 AP3B1O00203 1094 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 TRIM24O15164 1050 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 ARNTP27540 789 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 ANKRD26P1Q6NSI1 321 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 MAMDC4Q6UXC1 1216 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 SCN4BQ8IWT1 228 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 Q8N9G6 341 aaPredicted RBP16.73■□□□□ 0.27
CTDP1-201ENST00000075430 MROH8Q9H579 483 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 MRPL40Q9NQ50 206 aaKnown RBP16.73■□□□□ 0.27
CTDP1-201ENST00000075430 POLR2AP24928 1970 aaKnown RBP16.73■□□□□ 0.27
CTDP1-201ENST00000075430 LAMA2P24043 3122 aaKnown RBP16.73■□□□□ 0.27
CTDP1-201ENST00000075430 GMNNO75496 209 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 C8BP07358 591 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 RCVRNP35243 200 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 SLC26A2P50443 739 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 CDKN2DP55273 166 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 WNT3AP56704 352 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 UFM1P61960 85 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 NFATC3Q12968 1075 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 RBBP7Q16576 425 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 NOL9Q5SY16 702 aaKnown RBP16.73■□□□□ 0.27
CTDP1-201ENST00000075430 SPESP1Q6UW49 350 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 HEATR4Q86WZ0 1026 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 ZDHHC17Q8IUH5 632 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 DUSP16Q9BY84 665 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 SQORQ9Y6N5 450 aa16.73■□□□□ 0.27
CTDP1-201ENST00000075430 MGAMO43451 1857 aa16.72■□□□□ 0.27
CTDP1-201ENST00000075430 LINC00854A0A1B0GVQ3 168 aa16.72■□□□□ 0.27
CTDP1-201ENST00000075430 TCRBV3S1A0A5B6 114 aa16.72■□□□□ 0.27
CTDP1-201ENST00000075430 CXCL11O14625 94 aa16.72■□□□□ 0.27
CTDP1-201ENST00000075430 CBFA2T3O75081 653 aa16.72■□□□□ 0.27
CTDP1-201ENST00000075430 HLA-DQB2P05538 268 aa16.72■□□□□ 0.27
CTDP1-201ENST00000075430 FYNP06241 537 aa16.72■□□□□ 0.27
CTDP1-201ENST00000075430 HSPA1AP0DMV8 641 aaKnown RBP16.72■□□□□ 0.27
CTDP1-201ENST00000075430 HSPA1BP0DMV9 641 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms