RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 RENBPP51606 427 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 DIO3P55073 304 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 FRG1Q14331 258 aaKnown RBP14.61□□□□□ -0.07
SCARB2-221ENST00000640341 IHHQ14623 411 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 LDLRAD1Q5T700 205 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 PIK3R6Q5UE93 754 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 HMBOX1Q6NT76 420 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 CHST15Q7LFX5 561 aaPredicted RBP14.61□□□□□ -0.07
SCARB2-221ENST00000640341 ISCA2Q86U28 154 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 CFAP52Q8N1V2 620 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 TSPAN17Q96FV3 270 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 SEMA3CQ99985 751 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 MEAF6Q9HAF1 191 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 SUCOQ9UBS9 1254 aaKnown RBP14.61□□□□□ -0.07
SCARB2-221ENST00000640341 NEU3Q9UQ49 428 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 MYRFQ9Y2G1 1151 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 KLHL33A6NCF5 533 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 TRMUO75648 421 aaKnown RBP14.61□□□□□ -0.07
SCARB2-221ENST00000640341 CLCN5P51795 746 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 NDST2P52849 883 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 SIRPB2Q5JXA9 342 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 SCD5Q86SK9 330 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 FUNDC1Q8IVP5 155 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 CCDC126Q96EE4 140 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 TSGA13Q96PP4 275 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 PRKD2Q9BZL6 878 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 VPS28Q9UK41 221 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 COMMD10Q9Y6G5 202 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 SBF1O95248 1867 aa14.61□□□□□ -0.07
SCARB2-221ENST00000640341 SLC22A2O15244 555 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 HTRA2O43464 458 aaPredicted RBP14.6□□□□□ -0.07
SCARB2-221ENST00000640341 DNAJB2P25686 324 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 ACAP2Q15057 778 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 RABL3Q5HYI8 236 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 C6orf10Q5SRN2 563 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 ZNF678Q5SXM1 525 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 TTC33Q6PID6 262 aaPredicted RBP14.6□□□□□ -0.07
SCARB2-221ENST00000640341 CLVS1Q8IUQ0 354 aaPredicted RBP14.6□□□□□ -0.07
SCARB2-221ENST00000640341 THEM5Q8N1Q8 247 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 PCYOX1LQ8NBM8 494 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 TWIST2Q8WVJ9 160 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 PARK7Q99497 189 aaKnown RBP14.6□□□□□ -0.07
SCARB2-221ENST00000640341 SGIP1Q9BQI5 828 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 ZNF696Q9H7X3 374 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 ATXN10Q9UBB4 475 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 FGF10O15520 208 aaPredicted RBP14.6□□□□□ -0.07
SCARB2-221ENST00000640341 AP1G1O43747 822 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 GOT2P00505 430 aaKnown RBP14.6□□□□□ -0.07
SCARB2-221ENST00000640341 SLC2A3P11169 496 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 FMO4P31512 558 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 CSRP3P50461 194 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 PRKCQQ04759 706 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 YWHAHQ04917 246 aaPredicted RBP14.6□□□□□ -0.07
SCARB2-221ENST00000640341 RFTN1Q14699 578 aaPredicted RBP14.6□□□□□ -0.07
SCARB2-221ENST00000640341 UNC50Q53HI1 259 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 LZTR1Q8N653 840 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 FAM81AQ8TBF8 368 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 FAR2Q96K12 515 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 ACBD6Q9BR61 282 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 SPON2Q9BUD6 331 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 NME4O00746 187 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 TMCC1O94876 653 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 H6PDO95479 791 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 CDH2P19022 906 aaPredicted RBP14.6□□□□□ -0.07
SCARB2-221ENST00000640341 CAPN3P20807 821 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 IMPDH1P20839 514 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 OXTRP30559 389 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 YAP1P46937 504 aaKnown RBP14.6□□□□□ -0.07
SCARB2-221ENST00000640341 CYP51A1Q16850 503 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 PLA2G4EQ3MJ16 856 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 GDF6Q6KF10 455 aaPredicted RBP14.6□□□□□ -0.07
SCARB2-221ENST00000640341 CYHR1Q6ZMK1 362 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 SLC22A9Q8IVM8 553 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 ADAM2Q99965 735 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 HAUS8Q9BT25 410 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 SLC25A51Q9H1U9 297 aa14.6□□□□□ -0.07
SCARB2-221ENST00000640341 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.6□□□□□ -0.074e-8■■■■■ 28.1
SCARB2-221ENST00000640341 MGEA5O60502 916 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 GLP2RO95838 553 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 CHRNA1P02708 482 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 ZNF865P0CJ78 1059 aaPredicted RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 HSPA1AP0DMV8 641 aaKnown RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 HSPA1BP0DMV9 641 aaKnown RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 SLC7A1P30825 629 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 ACVRL1P37023 503 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 DNAJB13P59910 316 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 OR4D1Q15615 310 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 OTUD3Q5T2D3 398 aaPredicted RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 RAB44Q7Z6P3 723 aaPredicted RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 CHERPQ8IWX8 916 aaKnown RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 TTC9BQ8N6N2 239 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 GABPB2Q8TAK5 448 aaPredicted RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 DDI1Q8WTU0 396 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 GTF3C2Q8WUA4 911 aaPredicted RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 RMDN1Q96DB5 314 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 OSBPL11Q9BXB4 747 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 NOL6Q9H6R4 1146 aaKnown RBP14.59□□□□□ -0.07
SCARB2-221ENST00000640341 CSNK1G1Q9HCP0 422 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 PADI3Q9ULW8 664 aa14.59□□□□□ -0.07
SCARB2-221ENST00000640341 TRIM24O15164 1050 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms