RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SLC38A7Q9NVC3 462 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 TBC1D13Q9NVG8 400 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 GPRC5DQ9NZD1 345 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 GIMAP2Q9UG22 337 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 PIN4Q9Y237 131 aaKnown RBP19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 TTC24A2A3L6 582 aaPredicted RBP19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 HHLA1C9JL84 531 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 ARPC2O15144 300 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 CLOCKO15516 846 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 CBFA2T3O75081 653 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 WISP3O95389 354 aaPredicted RBP19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 INHBBP09529 407 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 CD247P20963 164 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 TTKP33981 857 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 TMEM207Q6UWW9 146 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 TMEM26Q6ZUK4 368 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 OFCC1Q8IZS5 231 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 ARRDC4Q8NCT1 418 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 BORCS5Q969J3 196 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 HDAC10Q969S8 669 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 TSPAN17Q96FV3 270 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 PAIP1Q9H074 479 aaKnown RBP19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 POLR1BQ9H9Y6 1135 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 ZNF711Q9Y462 761 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 FADS3Q9Y5Q0 445 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 PTGDR2Q9Y5Y4 395 aa19.61■□□□□ 0.73
PDLIM3-212ENST00000620787 KANSL1LA0AUZ9 987 aa19.6■□□□□ 0.73
PDLIM3-212ENST00000620787 RBM47A0AV96 593 aaKnown RBP19.6■□□□□ 0.73
PDLIM3-212ENST00000620787 MATN3O15232 486 aa19.6■□□□□ 0.73
PDLIM3-212ENST00000620787 ZNF829Q3KNS6 432 aaPredicted RBP19.6■□□□□ 0.73
PDLIM3-212ENST00000620787 FGD3Q5JSP0 725 aa19.6■□□□□ 0.73
PDLIM3-212ENST00000620787 UBXN11Q5T124 520 aa19.6■□□□□ 0.73
PDLIM3-212ENST00000620787 ABRAXAS1Q6UWZ7 409 aa19.6■□□□□ 0.73
PDLIM3-212ENST00000620787 FASTKD5Q7L8L6 764 aaKnown RBP19.6■□□□□ 0.73
PDLIM3-212ENST00000620787 PPP1R13LQ8WUF5 828 aa19.6■□□□□ 0.73
PDLIM3-212ENST00000620787 VPS50Q96JG6 964 aa19.6■□□□□ 0.73
PDLIM3-212ENST00000620787 NAA50Q9GZZ1 169 aaKnown RBP19.6■□□□□ 0.73
PDLIM3-212ENST00000620787 VTA1Q9NP79 307 aa19.6■□□□□ 0.73
PDLIM3-212ENST00000620787 DNAJC15Q9Y5T4 150 aa19.6■□□□□ 0.73
PDLIM3-212ENST00000620787 C9JVG2 144 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 EI24O14681 340 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 GFAPP14136 432 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 SLC6A2P23975 617 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 TNK2Q07912 1038 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 TMTC4Q5T4D3 741 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 COLGALT2Q8IYK4 626 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 TRPV3Q8NET8 790 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 PCED1BQ96HM7 432 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 MYBPHLA2RUH7 354 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 MYL3P08590 195 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 CHRM3P20309 590 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 CAPGP40121 348 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 CDKN2DP55273 166 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 SH3BP2P78314 561 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 GRB7Q14451 532 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 CYBRD1Q53TN4 286 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 GPR158Q5T848 1215 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 ISCA2Q86U28 154 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 PHYKPLQ8IUZ5 450 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 CLYBLQ8N0X4 340 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 CALML6Q8TD86 181 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 TMEM40Q8WWA1 233 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 TSPAN18Q96SJ8 248 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 SEZ6LQ9BYH1 1024 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 SLC39A8Q9C0K1 460 aa19.59■□□□□ 0.73
PDLIM3-212ENST00000620787 ANGPT2O15123 496 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 CLASP2O75122 1294 aaKnown RBP19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 SLC44A4Q53GD3 710 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 XKR5Q6UX68 686 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 KCTD8Q6ZWB6 473 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 ZNF354CQ86Y25 554 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 MIER2Q8N344 545 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 TERB1Q8NA31 727 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 SH3RF2Q8TEC5 729 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 TANKQ92844 425 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 RNF34Q969K3 372 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 COX4I2Q96KJ9 171 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 TRIM8Q9BZR9 551 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 KATNBL1Q9H079 304 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 SIK2Q9H0K1 926 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 C8orf4Q9NR00 106 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 RBM22Q9NW64 420 aaKnown RBP eCLIP19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 VWA7Q9Y334 891 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 PLXNB2O15031 1838 aa19.58■□□□□ 0.73
PDLIM3-212ENST00000620787 SUPT3HO75486 399 aa19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 GPIP06744 558 aa19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 MMP3P08254 477 aa19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 CDH13P55290 713 aa19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 HERVK_113P63132 956 aa19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 NFKB2Q00653 900 aa19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 PCBP1Q15365 356 aaKnown RBP eCLIP19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 ANKRD13AQ8IZ07 590 aa19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 DHRSXQ8N5I4 330 aa19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 PTERQ96BW5 349 aa19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 LRRC58Q96CX6 371 aa19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 PLEKHA8Q96JA3 519 aa19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 ERVK-6Q9BXR3 956 aa19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 SMPD3Q9NY59 655 aaPredicted RBP19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 CACNG4Q9UBN1 327 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms