RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 SYBUQ9NX95 663 aa14.71□□□□□ -0.05
CD48-203ENST00000613788 KCTD5Q9NXV2 234 aa14.71□□□□□ -0.05
CD48-203ENST00000613788 GGT7Q9UJ14 662 aa14.71□□□□□ -0.05
CD48-203ENST00000613788 PKP3Q9Y446 797 aa14.71□□□□□ -0.05
CD48-203ENST00000613788 MAD1L1Q9Y6D9 718 aa14.71□□□□□ -0.05
CD48-203ENST00000613788 MROH6A6NGR9 719 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 AURKAO14965 403 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 STX7O15400 261 aaKnown RBP14.71□□□□□ -0.06
CD48-203ENST00000613788 LDB2O43679 373 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 LZTS3O60299 673 aaPredicted RBP14.71□□□□□ -0.06
CD48-203ENST00000613788 MMP20O60882 483 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 NDUFS2O75306 463 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 TDGF1P13385 188 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 ECHS1P30084 290 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 FNTBP49356 437 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 STC1P52823 247 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 CRADDP78560 199 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 ACOX1Q15067 660 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 CNGA3Q16281 694 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 ZNF528Q3MIS6 628 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 MSS51Q4VC12 460 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 CCDC38Q502W7 563 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 SLC36A4Q6YBV0 504 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 CCDC25Q86WR0 208 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 HORMAD1Q86X24 394 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 CBARPQ8N350 705 aaPredicted RBP14.71□□□□□ -0.06
CD48-203ENST00000613788 MPP5Q8N3R9 675 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 TTC30BQ8N4P2 665 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 STYXQ8WUJ0 223 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 PEX13Q92968 403 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 STAMBPL1Q96FJ0 436 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 KIFC1Q9BW19 673 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 PARD6BQ9BYG5 372 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 MRM3Q9HC36 420 aaKnown RBP14.71□□□□□ -0.06
CD48-203ENST00000613788 SAYSD1Q9NPB0 183 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 RAD18Q9NS91 495 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 PKD2L2Q9NZM6 624 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 RIMKLBQ9ULI2 386 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 SOX13Q9UN79 622 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 TCAF1Q9Y4C2 921 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 ARL5AQ9Y689 179 aa14.71□□□□□ -0.06
CD48-203ENST00000613788 RGSL1A5PLK6 1076 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 PRR23AA6NEV1 266 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 MAP3K13O43283 966 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 RNGTTO60942 597 aaKnown RBP14.7□□□□□ -0.06
CD48-203ENST00000613788 TM7SF2O76062 418 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 SLC4A1P02730 911 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 HADHAP40939 763 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 DMWDQ09019 674 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 SGCGQ13326 291 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 TSTD2Q5T7W7 516 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 ZDHHC20Q5W0Z9 365 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 ZBED8Q8IZ13 594 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 MYRIPQ8NFW9 859 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 PYROXD1Q8WU10 500 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 EBNA1BP2Q99848 306 aaKnown RBP14.7□□□□□ -0.06
CD48-203ENST00000613788 GPR174Q9BXC1 333 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 PCED1AQ9H1Q7 454 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 CHRAC1Q9NRG0 131 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 IL17CQ9P0M4 197 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 TEX264Q9Y6I9 313 aa14.7□□□□□ -0.06
CD48-203ENST00000613788 A0A0U1RQS6 177 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 FAM237BA0A1B0GVD1 139 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 A0A1W2PQU0 124 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 IGLON5A6NGN9 336 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 WNT9AO14904 365 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 TTC4O95801 387 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 POLBP06746 335 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 C6P13671 934 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 ELK3P41970 407 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 CCR5P51681 352 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 PTPN5P54829 565 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 VSNL1P62760 191 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 SLMAPQ14BN4 828 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 ANGPT1Q15389 498 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 C11orf74Q86VG3 221 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 TRIM69Q86WT6 500 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 NRSN1Q8IZ57 195 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 OR4K2Q8NGD2 314 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 EID2BQ96D98 161 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 COQ10AQ96MF6 247 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 C1QTNF7Q9BXJ2 289 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 C1QTNF2Q9BXJ5 285 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 CDH19Q9H159 772 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 NLE1Q9NVX2 485 aaPredicted RBP14.69□□□□□ -0.06
CD48-203ENST00000613788 RAB21Q9UL25 225 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 INVSQ9Y283 1065 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 KCTD3Q9Y597 815 aa14.69□□□□□ -0.06
CD48-203ENST00000613788 CTIFO43310 598 aaKnown RBP14.68□□□□□ -0.06
CD48-203ENST00000613788 BUD23O43709 281 aaKnown RBP14.68□□□□□ -0.06
CD48-203ENST00000613788 BANF1O75531 89 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 RECQL5O94762 991 aaPredicted RBP14.68□□□□□ -0.06
CD48-203ENST00000613788 C1SP09871 688 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 PGAM1P18669 254 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 PAMP19021 973 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 CNR2P34972 360 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 MAGEA4P43358 317 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 SPINT3P49223 89 aa14.68□□□□□ -0.06
CD48-203ENST00000613788 ZNF140P52738 457 aaPredicted RBP14.68□□□□□ -0.06
CD48-203ENST00000613788 CREB5Q02930 508 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms