RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 E2F7Q96AV8 911 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 DNAJC1Q96KC8 554 aaKnown RBP8.94□□□□□ -0.98
CCDC47-207ENST00000612558 TBATAQ96M53 351 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 TUBGCP5Q96RT8 1024 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 GPR22Q99680 433 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 VPS11Q9H270 941 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 TNKS2Q9H2K2 1166 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 RABEP2Q9H5N1 569 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 ATP13A3Q9H7F0 1226 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 ZFP14Q9HCL3 533 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 NLE1Q9NVX2 485 aaPredicted RBP8.94□□□□□ -0.98
CCDC47-207ENST00000612558 THG1LQ9NWX6 298 aaKnown RBP8.94□□□□□ -0.98
CCDC47-207ENST00000612558 LMCD1Q9NZU5 365 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 SLC17A7Q9P2U7 560 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 EVLQ9UI08 416 aaPredicted RBP8.94□□□□□ -0.98
CCDC47-207ENST00000612558 GGT7Q9UJ14 662 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 FBXO5Q9UKT4 447 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 CDH7Q9ULB5 785 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 GRID1Q9ULK0 1009 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 PCDHB9Q9Y5E1 797 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 SPO11Q9Y5K1 396 aa8.94□□□□□ -0.98
CCDC47-207ENST00000612558 TTLL8A6PVC2 850 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 TCP11X1B4DZS4 312 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 TRAFD1O14545 582 aaPredicted RBP8.93□□□□□ -0.98
CCDC47-207ENST00000612558 POP4O95707 220 aaKnown RBP8.93□□□□□ -0.98
CCDC47-207ENST00000612558 CISD3P0C7P0 127 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 DHRS4L1P0CG22 281 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 DRD4P21917 467 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 SERPINA4P29622 427 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 SLC8A1P32418 973 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 NNMTP40261 264 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 ABL2P42684 1182 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 CD151P48509 253 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 DGKGP49619 791 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 ZNF140P52738 457 aaPredicted RBP8.93□□□□□ -0.98
CCDC47-207ENST00000612558 MPP1Q00013 466 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 RAD51Q06609 339 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 GRM3Q14832 879 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 PDGFRLQ15198 375 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 DLG2Q15700 870 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 PDK4Q16654 411 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 GEN1Q17RS7 908 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 INSCQ1MX18 579 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 ACCSLQ4AC99 568 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 CARD16Q5EG05 197 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 TMEM215Q68D42 235 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 TRIM68Q6AZZ1 485 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 CES5AQ6NT32 575 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 MRNIPQ6NTE8 343 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 KYAT3Q6YP21 454 aaKnown RBP8.93□□□□□ -0.98
CCDC47-207ENST00000612558 RGS9BPQ6ZS82 235 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 CDHR3Q6ZTQ4 885 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 PTAR1Q7Z6K3 402 aaPredicted RBP8.93□□□□□ -0.98
CCDC47-207ENST00000612558 CILP2Q8IUL8 1156 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 LRRC34Q8IZ02 419 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 RYBPQ8N488 228 aaPredicted RBP8.93□□□□□ -0.98
CCDC47-207ENST00000612558 GPR150Q8NGU9 434 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 OR6K2Q8NGY2 324 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 WFIKKN2Q8TEU8 576 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 PIH1D2Q8WWB5 315 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 ATXN7L3BQ96GX2 97 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 MYO19Q96H55 970 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 CDKN2AIPNLQ96HQ2 116 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 CNTNAP3BQ96NU0 1288 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 FAM111AQ96PZ2 611 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 FAM83CQ9BQN1 747 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 CNTNAP3Q9BZ76 1288 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 CPEB1Q9BZB8 566 aaKnown RBP8.93□□□□□ -0.98
CCDC47-207ENST00000612558 FAM107BQ9H098 131 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 NSRP1Q9H0G5 558 aaKnown RBP8.93□□□□□ -0.98
CCDC47-207ENST00000612558 MAGEE1Q9HCI5 957 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 SNX15Q9NRS6 342 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 SLCO3A1Q9UIG8 710 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 ERVW-1Q9UQF0 538 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 SLC27A6Q9Y2P4 619 aa8.93□□□□□ -0.98
CCDC47-207ENST00000612558 DOCK8Q8NF50 2099 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 CCDC162PA2VCL2 907 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 AURKAO14965 403 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 TRIM24O15164 1050 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 CD3EAPO15446 510 aaKnown RBP8.92□□□□□ -0.98
CCDC47-207ENST00000612558 BUD23O43709 281 aaKnown RBP8.92□□□□□ -0.98
CCDC47-207ENST00000612558 GLRA3O75311 464 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 HAUS5O94927 633 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 PIGNO95427 931 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 GOT2P00505 430 aaKnown RBP8.92□□□□□ -0.98
CCDC47-207ENST00000612558 ASLP04424 464 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 ATP5BP06576 529 aaKnown RBP8.92□□□□□ -0.98
CCDC47-207ENST00000612558 SRPRAP08240 638 aaKnown RBP8.92□□□□□ -0.98
CCDC47-207ENST00000612558 GSTA1P08263 222 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 F7P08709 466 aaPredicted RBP8.92□□□□□ -0.98
CCDC47-207ENST00000612558 ARSAP15289 507 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 TAC1P20366 129 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 FCARP24071 287 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 FOXN2P32314 431 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 TMPRSS15P98073 1019 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 USP10Q14694 798 aaKnown RBP8.92□□□□□ -0.98
CCDC47-207ENST00000612558 PTPRCAPQ14761 206 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 C4orf48Q5BLP8 95 aa8.92□□□□□ -0.98
CCDC47-207ENST00000612558 SDCCAG8Q86SQ7 713 aaPredicted RBP8.92□□□□□ -0.98
CCDC47-207ENST00000612558 CCDC116Q8IYX3 515 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms