RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 PDE1CQ14123 709 aaPredicted RBP19.32■□□□□ 0.68
SGMS1-208ENST00000608287 GRM3Q14832 879 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 TBR1Q16650 682 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 TMEM259Q4ZIN3 620 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 LRRC73Q5JTD7 316 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 TTC7BQ86TV6 843 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 CCDC170Q8IYT3 715 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 FAM26EQ8N5C1 309 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 SCG3Q8WXD2 468 aaKnown RBP19.32■□□□□ 0.68
SGMS1-208ENST00000608287 ZNF599Q96NL3 588 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 PANX2Q96RD6 677 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 ZNF670Q9BS34 389 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 SLC17A9Q9BYT1 436 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 ITM2BQ9Y287 266 aa19.32■□□□□ 0.68
SGMS1-208ENST00000608287 NTN3O00634 580 aaPredicted RBP19.31■□□□□ 0.68
SGMS1-208ENST00000608287 TSPAN6O43657 245 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 NOBOXO60393 691 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 RGRP47804 291 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 PDX1P52945 283 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 SLC10A7Q0GE19 358 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 ZNF235Q14590 738 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 LBRQ14739 615 aaKnown RBP19.31■□□□□ 0.68
SGMS1-208ENST00000608287 SPA17Q15506 151 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 ANKRD20A8PQ5CZ79 823 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 PERM1Q5SV97 790 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 CFAP58Q5T655 872 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 TMCO4Q5TGY1 634 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 SRLQ86TD4 932 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 OR6C4Q8NGE1 309 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 PCDH19Q8TAB3 1148 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 GFM1Q96RP9 751 aaKnown RBP19.31■□□□□ 0.68
SGMS1-208ENST00000608287 ANP32EQ9BTT0 268 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 SUV39H2Q9H5I1 410 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 DKK3Q9UBP4 350 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 APOBEC3BQ9UH17 382 aaKnown RBP19.31■□□□□ 0.68
SGMS1-208ENST00000608287 GGT7Q9UJ14 662 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 TUBD1Q9UJT1 453 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 ANAPC2Q9UJX6 822 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 PADI4Q9UM07 663 aa19.31■□□□□ 0.68
SGMS1-208ENST00000608287 UNC79Q9P2D8 2635 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 PMS2P1A4D2B8 440 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 LMO7DNF2Z398 122 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 MAFKO60675 156 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 LCA5LO95447 670 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 XPAP23025 273 aaPredicted RBP19.3■□□□□ 0.68
SGMS1-208ENST00000608287 CCKBRP32239 447 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 NOP2P46087 812 aaKnown RBP19.3■□□□□ 0.68
SGMS1-208ENST00000608287 CSNK1DP48730 415 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 RENBPP51606 427 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 SGCGQ13326 291 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 NCBP2-AS2Q69YL0 99 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 SLC35F3Q8IY50 421 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 DENND6BQ8NEG7 585 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 NSMCE1Q8WV22 266 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 BMFQ96LC9 184 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 LENG8Q96PV6 779 aaPredicted RBP19.3■□□□□ 0.68
SGMS1-208ENST00000608287 TUBGCP5Q96RT8 1024 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 SLC13A1Q9BZW2 595 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 ATP13A3Q9H7F0 1226 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 PCDHA13Q9Y5I0 950 aa19.3■□□□□ 0.68
SGMS1-208ENST00000608287 NOTCH2Q04721 2471 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 LRRD1A4D1F6 860 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 IGLON5A6NGN9 336 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 D6RAR5 112 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 MFSD11O43934 449 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 BUB1BO60566 1050 aaPredicted RBP19.29■□□□□ 0.68
SGMS1-208ENST00000608287 PAK4O96013 591 aaPredicted RBP19.29■□□□□ 0.68
SGMS1-208ENST00000608287 TNNT1P13805 278 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 TIMP2P16035 220 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 KDELR1P24390 212 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 SERPINA4P29622 427 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 SCNN1BP51168 640 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 THOP1P52888 689 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 FOXK1P85037 733 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 NSUN2Q08J23 767 aaKnown RBP eCLIP19.29■□□□□ 0.68
SGMS1-208ENST00000608287 PAFAH1B3Q15102 231 aaKnown RBP19.29■□□□□ 0.68
SGMS1-208ENST00000608287 TCEAL1Q15170 157 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 CAMK1DQ8IU85 385 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 BBS5Q8N3I7 341 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 PAF1Q8N7H5 531 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 RAPGEF5Q92565 580 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 ZNF641Q96N77 438 aaPredicted RBP19.29■□□□□ 0.68
SGMS1-208ENST00000608287 PSKH2Q96QS6 385 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 B3GNT4Q9C0J1 378 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 LUC7LQ9NQ29 371 aaKnown RBP19.29■□□□□ 0.68
SGMS1-208ENST00000608287 DOLKQ9UPQ8 538 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 MAN2B2Q9Y2E5 1009 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 HYOU1Q9Y4L1 999 aa19.29■□□□□ 0.68
SGMS1-208ENST00000608287 ANKRD36A6QL64 1941 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 CLEC18AA5D8T8 446 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 POM121BA6NF01 834 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 SOWAHDA6NJG2 315 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 TOR1BO14657 336 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 AREL1O15033 823 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 SPINT1O43278 529 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 SPOPO43791 374 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 MAP3K6O95382 1288 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 PEX11BO96011 259 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 ITIH2P19823 946 aa19.28■□□□□ 0.68
SGMS1-208ENST00000608287 CASRP41180 1078 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms