RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 Q6ZVL8 140 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 USP45Q70EL2 814 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 HEATR4Q86WZ0 1026 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 PROSER1Q86XN7 944 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 SFTPA2Q8IWL1 248 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 SLC35F3Q8IY50 421 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 CCDC170Q8IYT3 715 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 CBARPQ8N350 705 aaPredicted RBP12.3□□□□□ -0.44
CTSA-210ENST00000606000 FAM181AQ8N9Y4 354 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 TPCN2Q8NHX9 752 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 IFI44Q8TCB0 444 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 KRT35Q92764 455 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 FATE1Q969F0 183 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 HAUS1Q96CS2 278 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 DTD2Q96FN9 168 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 SCRN2Q96FV2 425 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 ZNF830Q96NB3 372 aaPredicted RBP12.3□□□□□ -0.44
CTSA-210ENST00000606000 PANX2Q96RD6 677 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 IL12RB2Q99665 862 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 DUSP23Q9BVJ7 150 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 GOLGA6AQ9NYA3 693 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 SEPT10Q9P0V9 454 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 SIRPGQ9P1W8 387 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 DUSP10Q9Y6W6 482 aa12.3□□□□□ -0.44
CTSA-210ENST00000606000 MAP1BP46821 2468 aaKnown RBP12.3□□□□□ -0.44
CTSA-210ENST00000606000 A0A0J9YYE9 177 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 A0A1W2PQ67 120 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 CAPN8A6NHC0 703 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 CACNB4O00305 520 aaPredicted RBP12.29□□□□□ -0.44
CTSA-210ENST00000606000 PSTPIP1O43586 416 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 SOD1P00441 154 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 TRBC1P01850 177 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 ANXA6P08133 673 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 HTR1BP28222 390 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 CYLC1P35663 651 aaPredicted RBP12.29□□□□□ -0.44
CTSA-210ENST00000606000 EPHB1P54762 984 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 IFI35P80217 286 aaPredicted RBP12.29□□□□□ -0.44
CTSA-210ENST00000606000 CYP4F3Q08477 520 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 ILKQ13418 452 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 ARHGEF7Q14155 803 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 GALNT3Q14435 633 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 SPA17Q15506 151 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 ODF2Q5BJF6 829 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 C6orf132Q5T0Z8 1188 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 EFL1Q7Z2Z2 1120 aaKnown RBP12.29□□□□□ -0.44
CTSA-210ENST00000606000 VSIG1Q86XK7 387 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 KYQ8NBH2 561 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 OR56A4Q8NGH8 313 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 CCL4L1Q8NHW4 92 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 AGAP3Q96P47 875 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 RBM15Q96T37 977 aaKnown RBP eCLIP12.29□□□□□ -0.44
CTSA-210ENST00000606000 AGAP2Q99490 1192 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 HERPUD2Q9BSE4 406 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 BOCQ9BWV1 1114 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 MAK16Q9BXY0 300 aaKnown RBP12.29□□□□□ -0.44
CTSA-210ENST00000606000 CCDC86Q9H6F5 360 aaKnown RBP12.29□□□□□ -0.44
CTSA-210ENST00000606000 WDR26Q9H7D7 661 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 PCDH9Q9HC56 1237 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 DDX56Q9NY93 547 aaKnown RBP12.29□□□□□ -0.44
CTSA-210ENST00000606000 MOSPD1Q9UJG1 213 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 RALYQ9UKM9 306 aaKnown RBP12.29□□□□□ -0.44
CTSA-210ENST00000606000 PPIL1Q9Y3C6 166 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 PCDHB1Q9Y5F3 818 aa12.29□□□□□ -0.44
CTSA-210ENST00000606000 EPN1Q9Y6I3 576 aaPredicted RBP12.29□□□□□ -0.44
CTSA-210ENST00000606000 KMT2BQ9UMN6 2715 aaPredicted RBP12.28□□□□□ -0.44
CTSA-210ENST00000606000 hCG_1818297A0A087WSY0 165 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 LMO7DNF2Z398 122 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 F5H423 210 aaPredicted RBP12.28□□□□□ -0.44
CTSA-210ENST00000606000 TPP1O14773 563 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 OPA1O60313 960 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 CST8O60676 142 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 CLDN7O95471 211 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 FUCA1P04066 466 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 CTSEP14091 401 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 TGM2P21980 687 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 TRIM23P36406 574 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 CDK3Q00526 305 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 PTSQ03393 145 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 NR0B2Q15466 257 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 TAZQ16635 292 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 RAET1GQ6H3X3 334 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 C11orf63Q6NUN7 778 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 KDELC2Q7Z4H8 507 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 TECPR1Q7Z6L1 1165 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 TRIM74Q86UV6 250 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 TMEM139Q8IV31 216 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 SPC24Q8NBT2 197 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 SCAMP4Q969E2 229 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 TBATAQ96M53 351 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 LACRTQ9GZZ8 138 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 TMEM168Q9H0V1 697 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 ABCG8Q9H221 673 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 CYP4F12Q9HCS2 524 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 AMACRQ9UHK6 382 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 CLCA2Q9UQC9 943 aa12.28□□□□□ -0.44
CTSA-210ENST00000606000 SCN8AQ9UQD0 1980 aa12.27□□□□□ -0.44
CTSA-210ENST00000606000 A0A0A6YYK5 440 aaPredicted RBP12.27□□□□□ -0.45
CTSA-210ENST00000606000 PRSS38A1L453 326 aa12.27□□□□□ -0.45
CTSA-210ENST00000606000 EME2A4GXA9 379 aaPredicted RBP12.27□□□□□ -0.45
CTSA-210ENST00000606000 PSMD11O00231 422 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms