RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 USP39Q53GS9 565 aaKnown RBP11.58□□□□□ -0.56
ZNF548-211ENST00000600927 PITRM1Q5JRX3 1037 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 PLA2G2CQ5R387 149 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 CERCAMQ5T4B2 595 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 SDE2Q6IQ49 451 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 CAPN12Q6ZSI9 719 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 GALNT7Q86SF2 657 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 CTAGE3PQ8IX95 158 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 PLPP6Q8IY26 295 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 PGBD5Q8N414 524 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 CARNMT1Q8N4J0 409 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 PPM1NQ8N819 430 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 PPHLN1Q8NEY8 458 aaKnown RBP11.58□□□□□ -0.56
ZNF548-211ENST00000600927 IPMKQ8NFU5 416 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 OR52K2Q8NGK3 314 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 CALML6Q8TD86 181 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 ISG20Q96AZ6 181 aaKnown RBP11.58□□□□□ -0.56
ZNF548-211ENST00000600927 SEMA3CQ99985 751 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 FICDQ9BVA6 458 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 MKRN2Q9H000 416 aaKnown RBP11.58□□□□□ -0.56
ZNF548-211ENST00000600927 TRABDQ9H4I3 376 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 INTS9Q9NV88 658 aaKnown RBP11.58□□□□□ -0.56
ZNF548-211ENST00000600927 MKS1Q9NXB0 559 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 NKIRAS1Q9NYS0 192 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 USP36Q9P275 1121 aaKnown RBP11.58□□□□□ -0.56
ZNF548-211ENST00000600927 TBK1Q9UHD2 729 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 TCAF1Q9Y4C2 921 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 PCDHGA5Q9Y5G8 931 aa11.58□□□□□ -0.56
ZNF548-211ENST00000600927 TNRC6BQ9UPQ9 1833 aaKnown RBP11.58□□□□□ -0.56
ZNF548-211ENST00000600927 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.57□□□□□ -0.56
ZNF548-211ENST00000600927 CBX4O00257 560 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 ATP9BO43861 1147 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 TYROBPO43914 113 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 USP12O75317 370 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 PMPCBO75439 489 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 ZWINTO95229 277 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 NDST3O95803 873 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 CD160O95971 181 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 IGLV3-19P01714 112 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 POLR2EP19388 210 aaKnown RBP11.57□□□□□ -0.56
ZNF548-211ENST00000600927 LSP1P33241 339 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 SPRP35270 261 aaPredicted RBP11.57□□□□□ -0.56
ZNF548-211ENST00000600927 GP5P40197 560 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 CSKP41240 450 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 ATP1A2P50993 1020 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 RPL26P61254 145 aaKnown RBP11.57□□□□□ -0.56
ZNF548-211ENST00000600927 AP1S1P61966 158 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 ARF5P84085 180 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 DSC2Q02487 901 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 STARD3Q14849 445 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 UGP2Q16851 508 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 KIAA0930Q6ICG6 404 aaPredicted RBP11.57□□□□□ -0.56
ZNF548-211ENST00000600927 SERPINA13PQ6UXR4 307 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 KIAA0408Q6ZU52 694 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 SH2D5Q6ZV89 423 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 CNTN4Q8IWV2 1026 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 SRRM1Q8IYB3 904 aaKnown RBP11.57□□□□□ -0.56
ZNF548-211ENST00000600927 FRMD1Q8N878 549 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 BRSK1Q8TDC3 778 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 DENND1AQ8TEH3 1009 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 CYB5D2Q8WUJ1 264 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 IFT43Q96FT9 208 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 SLC6A17Q9H1V8 727 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 CD93Q9NPY3 652 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 TREX1Q9NSU2 369 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 UBP1Q9NZI7 540 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 ZFATQ9P243 1243 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 TXNDC16Q9P2K2 825 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 CTNNAL1Q9UBT7 734 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 VPS28Q9UK41 221 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 RPL26L1Q9UNX3 145 aaKnown RBP11.57□□□□□ -0.56
ZNF548-211ENST00000600927 SHROOM3Q8TF72 1996 aa11.57□□□□□ -0.56
ZNF548-211ENST00000600927 SPAG17Q6Q759 2223 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 IGHV1OR15-9A0A0B4J2B8 117 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 A0A1W2PQ67 120 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 TMEM120BA0PK00 339 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 MROH6A6NGR9 719 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 CXorf49A8MYA2 514 aaPredicted RBP11.56□□□□□ -0.56
ZNF548-211ENST00000600927 ZNF217O75362 1048 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 RHOBTB1O94844 696 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 ATP5BP06576 529 aaKnown RBP11.56□□□□□ -0.56
ZNF548-211ENST00000600927 EPHX1P07099 455 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 SRPRAP08240 638 aaKnown RBP11.56□□□□□ -0.56
ZNF548-211ENST00000600927 HLA-EP13747 358 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 CHN1P15882 459 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 LAMA1P25391 3075 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 MZF1P28698 734 aaPredicted RBP11.56□□□□□ -0.56
ZNF548-211ENST00000600927 GNGT1P63211 74 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 PDE1BQ01064 536 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 ACVR1Q04771 509 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 GRM3Q14832 879 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 CSRP2Q16527 193 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 SKIDA1Q1XH10 827 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 TEDDM1Q5T9Z0 273 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 PEAR1Q5VY43 1037 aaPredicted RBP11.56□□□□□ -0.56
ZNF548-211ENST00000600927 TRMT10BQ6PF06 316 aaKnown RBP11.56□□□□□ -0.56
ZNF548-211ENST00000600927 LCA5Q86VQ0 697 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 APCDD1Q8J025 514 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 BANPQ8N9N5 519 aa11.56□□□□□ -0.56
ZNF548-211ENST00000600927 OR2T3Q8NH03 318 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms