RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 TMC3Q7Z5M5 1100 aa16.57■□□□□ 0.24
SHKBP1-219ENST00000599575 ABI3BPQ7Z7G0 1075 aa16.57■□□□□ 0.24
SHKBP1-219ENST00000599575 GLIS1Q8NBF1 620 aa16.57■□□□□ 0.24
SHKBP1-219ENST00000599575 DTX3LQ8TDB6 740 aa16.57■□□□□ 0.24
SHKBP1-219ENST00000599575 BRSK1Q8TDC3 778 aa16.57■□□□□ 0.24
SHKBP1-219ENST00000599575 ZNF592Q92610 1267 aa16.57■□□□□ 0.24
SHKBP1-219ENST00000599575 KLF6Q99612 283 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-219ENST00000599575 NUSAP1Q9BXS6 441 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-219ENST00000599575 MIR1-1HGQ9H1L0 117 aa16.57■□□□□ 0.24
SHKBP1-219ENST00000599575 ARRDC1-AS1Q9H2J1 176 aa16.57■□□□□ 0.24
SHKBP1-219ENST00000599575 EBF2Q9HAK2 575 aa16.57■□□□□ 0.24
SHKBP1-219ENST00000599575 PKD2L2Q9NZM6 624 aa16.57■□□□□ 0.24
SHKBP1-219ENST00000599575 ZFHX2Q9C0A1 2572 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-219ENST00000599575 GPR179Q6PRD1 2367 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 A6NNZ2 444 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 KHNYNO15037 678 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 CRTAMO95727 393 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 PRKCGP05129 697 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 SYPP08247 313 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 ZSCAN5DPP0CG00 497 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 ETS1P14921 441 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 RABIFP47224 123 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 DCDC1P59894 354 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 BASP1P80723 227 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 GPS1Q13098 491 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 MTM1Q13496 603 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 PTK6Q13882 451 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 FGL2Q14314 439 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 ACOX1Q15067 660 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 DENND5AQ6IQ26 1287 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 ESRP1Q6NXG1 681 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 IL27RAQ6UWB1 636 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 KYAT3Q6YP21 454 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 TECPR1Q7Z6L1 1165 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 PCGF5Q86SE9 256 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 ZCCHC9Q8N567 271 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 DTD2Q96FN9 168 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 GPR63Q9BZJ6 419 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 AASDHPPTQ9NRN7 309 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 TMEM74BQ9NUR3 256 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 ZNF711Q9Y462 761 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 FRYLO94915 3013 aa16.56■□□□□ 0.24
SHKBP1-219ENST00000599575 C2orf81A6NN90 581 aa16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 F5H423 210 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 ZNF500O60304 480 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 DFNA5O60443 496 aa16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 CLDN7O95471 211 aa16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 HOXC4P09017 264 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 TSHRP16473 764 aa16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 MAOBP27338 520 aa16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 TAF1AQ15573 450 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 PDPK2PQ6A1A2 396 aa16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 TSPAN33Q86UF1 283 aa16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 SLC25A41Q8N5S1 370 aa16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 TP53I13Q8NBR0 393 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 NUS1Q96E22 293 aa16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 FRMD8Q9BZ67 464 aaPredicted RBP16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 CAPN10Q9HC96 672 aa16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 MRFAP1Q9Y605 127 aa16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 SPAG17Q6Q759 2223 aa16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 ABCA7Q8IZY2 2146 aa16.55■□□□□ 0.24
SHKBP1-219ENST00000599575 A0A1W2PR77 199 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 FAM187AA6NFU0 413 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 A8MX80 341 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 TLR4O00206 839 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 MLNP12872 115 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 TRIM23P36406 574 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 PTGIRP43119 386 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 CHRNA4P43681 627 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 SPINT3P49223 89 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 C21orf59P57076 290 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 WSCD2Q2TBF2 565 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 TRIM61Q5EBN2 209 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 FAM182AQ5T1J6 154 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 FAXCQ5TGI0 409 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 PPP1R21Q6ZMI0 780 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 Q6ZVL8 140 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 NLRP9Q7RTR0 991 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 LYSMD3Q7Z3D4 306 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 GLT6D1Q7Z4J2 308 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 HSD11B1LQ7Z5J1 315 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 KLHL7Q8IXQ5 586 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 OXR1Q8N573 874 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 DNAAF3Q8N9W5 541 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 MCUQ8NE86 351 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 PEX13Q92968 403 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 KLHDC7BQ96G42 594 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 SLC6A18Q96N87 628 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 PLEKHG4BQ96PX9 1271 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 ERVMER34-1Q9H9K5 563 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 CASS4Q9NQ75 786 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 SEMA4GQ9NTN9 838 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 RAPGEFL1Q9UHV5 662 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 PKP3Q9Y446 797 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 OTOGLQ3ZCN5 2332 aa16.54■□□□□ 0.24
SHKBP1-219ENST00000599575 CFIP05156 583 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 GM2AP17900 193 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 LPOP22079 712 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 ADCY8P40145 1251 aa16.53■□□□□ 0.24
SHKBP1-219ENST00000599575 HADHAP40939 763 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms