RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 SMTNL2Q2TAL5 461 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 TMCO4Q5TGY1 634 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 ZNF571Q7Z3V5 609 aaPredicted RBP14.7□□□□□ -0.06
IRF3-223ENST00000599223 HEATR4Q86WZ0 1026 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 MED8Q96G25 268 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 EIF3CQ99613 913 aaKnown RBP14.7□□□□□ -0.06
IRF3-223ENST00000599223 STRADBQ9C0K7 418 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 WDR70Q9NW82 654 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 A0A0U1RQS6 177 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 NPIPB15A6NHN6 443 aaPredicted RBP14.69□□□□□ -0.06
IRF3-223ENST00000599223 DDX3XO00571 662 aaKnown RBP eCLIP14.69□□□□□ -0.06
IRF3-223ENST00000599223 TNFRSF10CO14798 259 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 DAPK3O43293 454 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 HTRA2O43464 458 aaPredicted RBP14.69□□□□□ -0.06
IRF3-223ENST00000599223 PRPSAP2O60256 369 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 HOXC4P09017 264 aaPredicted RBP14.69□□□□□ -0.06
IRF3-223ENST00000599223 JMJD7P0C870 316 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 MYCLP1P12525 358 aaPredicted RBP14.69□□□□□ -0.06
IRF3-223ENST00000599223 CDK11BP21127 795 aaKnown RBP14.69□□□□□ -0.06
IRF3-223ENST00000599223 NSUN2Q08J23 767 aaKnown RBP eCLIP14.69□□□□□ -0.06
IRF3-223ENST00000599223 TRAF2Q12933 501 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 RFTN1Q14699 578 aaPredicted RBP14.69□□□□□ -0.06
IRF3-223ENST00000599223 LBRQ14739 615 aaKnown RBP14.69□□□□□ -0.06
IRF3-223ENST00000599223 C16orf72Q14CZ0 275 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 ASIC2Q16515 512 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 TXNRD3NBQ6F5E7 133 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 PNCKQ6P2M8 343 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 HSD11B1LQ7Z5J1 315 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 VASH2Q86V25 355 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 NRROSQ86YC3 692 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 EXD3Q8N9H8 876 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 OR6C4Q8NGE1 309 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 FNIP1Q8TF40 1166 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 PATE1Q8WXA2 126 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 SPOCK2Q92563 424 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 PMEPA1Q969W9 287 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 ZNF653Q96CK0 615 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 NUS1Q96E22 293 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 TMEM74Q96NL1 305 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 SMIM14Q96QK8 99 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 SEMA6CQ9H3T2 930 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 DPEP2Q9H4A9 486 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 HAUS4Q9H6D7 363 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 RDH14Q9HBH5 336 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 SPATS2LQ9NUQ6 558 aaKnown RBP14.69□□□□□ -0.06
IRF3-223ENST00000599223 DONSONQ9NYP3 566 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.69□□□□□ -0.06
IRF3-223ENST00000599223 LRIT1Q9P2V4 623 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 CNOT8Q9UFF9 292 aaKnown RBP14.69□□□□□ -0.06
IRF3-223ENST00000599223 SEPT3Q9UH03 358 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 PCDHGC4Q9Y5F7 938 aa14.69□□□□□ -0.06
IRF3-223ENST00000599223 B8ZZF3 427 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 C9orf172C9J069 976 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 HEXIM1O94992 359 aaKnown RBP14.68□□□□□ -0.06
IRF3-223ENST00000599223 CPP00450 1065 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 FTLP02792 175 aaPredicted RBP14.68□□□□□ -0.06
IRF3-223ENST00000599223 CEACAM5P06731 702 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 DESP17661 470 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 AK4P27144 223 aaPredicted RBP14.68□□□□□ -0.06
IRF3-223ENST00000599223 ETV3P41162 512 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 MAXP61244 160 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 B4GALNT1Q00973 533 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 DPYSL2Q16555 572 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 LINC00303Q3SY05 128 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 DENND2CQ68D51 928 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 RFLNAQ6ZTI6 216 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 ZNF438Q7Z4V0 828 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 TSPAN33Q86UF1 283 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 LUZP1Q86V48 1076 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 C17orf82Q86X59 251 aaPredicted RBP14.68□□□□□ -0.06
IRF3-223ENST00000599223 ZFAND4Q86XD8 727 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 PAF1Q8N7H5 531 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 DTD2Q96FN9 168 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 MGME1Q9BQP7 344 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 NUDT22Q9BRQ3 303 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 FRMD8Q9BZ67 464 aaPredicted RBP14.68□□□□□ -0.06
IRF3-223ENST00000599223 CARS2Q9HA77 564 aaKnown RBP14.68□□□□□ -0.06
IRF3-223ENST00000599223 NOD2Q9HC29 1040 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 RTN4Q9NQC3 1192 aaKnown RBP14.68□□□□□ -0.06
IRF3-223ENST00000599223 MOSPD1Q9UJG1 213 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 MYO6Q9UM54 1294 aa14.68□□□□□ -0.06
IRF3-223ENST00000599223 TMX2-CTNND1H3BSU7 103 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 NVLO15381 856 aaKnown RBP14.67□□□□□ -0.06
IRF3-223ENST00000599223 B4GAT1O43505 415 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 NUDT21O43809 227 aaKnown RBP14.67□□□□□ -0.06
IRF3-223ENST00000599223 SOCS5O75159 536 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 RNF8O76064 485 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 SOD1P00441 154 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 CCDC172P0C7W6 258 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 LIPCP11150 499 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 CCNB1P14635 433 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 PNLIPP16233 465 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 AMPD1P23109 780 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 KELP23276 732 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 VIPR1P32241 457 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 POLD2P49005 469 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 HCAR3P49019 387 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 ARSDP51689 593 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 OR1D5P58170 312 aa14.67□□□□□ -0.06
IRF3-223ENST00000599223 CDK3Q00526 305 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms