RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 BRINP1O60477 761 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 SOCS5O75159 536 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 CSO75390 466 aaKnown RBP13.78□□□□□ -0.2
SCAF1-203ENST00000598359 HEXIM1O94992 359 aaKnown RBP13.78□□□□□ -0.2
SCAF1-203ENST00000598359 RASGRP1O95267 797 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 PGLSO95336 258 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 TPM1P09493 284 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 HTR1BP28222 390 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 ETV3P41162 512 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 DSC2Q02487 901 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 C6orf132Q5T0Z8 1188 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 CDCP2Q5VXM1 449 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 RFLNAQ6ZTI6 216 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 SFTPA2Q8IWL1 248 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 TEX26Q8N6G2 289 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 TC2NQ8N9U0 490 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 KYQ8NBH2 561 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 CCDC42Q96M95 316 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 ZNF670Q9BS34 389 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 USP29Q9HBJ7 922 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 DOLKQ9UPQ8 538 aa13.78□□□□□ -0.2
SCAF1-203ENST00000598359 LRRD1A4D1F6 860 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 EME2A4GXA9 379 aaPredicted RBP13.77□□□□□ -0.21
SCAF1-203ENST00000598359 CACNB4O00305 520 aaPredicted RBP13.77□□□□□ -0.21
SCAF1-203ENST00000598359 MATN3O15232 486 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 LRP4O75096 1905 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 MPOP05164 745 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 GP1BAP07359 652 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 KRT7P08729 469 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 TNNT1P13805 278 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 KDELR1P24390 212 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 KIAA1024LP59773 190 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 RTP5Q14D33 572 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 PDK2Q15119 407 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 ELOCQ15369 112 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 IFI16Q16666 785 aaKnown RBP13.77□□□□□ -0.21
SCAF1-203ENST00000598359 ARMC12Q5T9G4 340 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 PNCKQ6P2M8 343 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 B4GALNT4Q76KP1 1039 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 OR56A4Q8NGH8 313 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 PIH1D2Q8WWB5 315 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 MAML1Q92585 1016 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 FAF2Q96CS3 445 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 NUS1Q96E22 293 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 TBATAQ96M53 351 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 PANX2Q96RD6 677 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 NRSN2Q9GZP1 204 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 WDR26Q9H7D7 661 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 SYNDIG1Q9H7V2 258 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 EVA1BQ9NVM1 165 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 RBM22Q9NW64 420 aaKnown RBP eCLIP13.77□□□□□ -0.21
SCAF1-203ENST00000598359 DTLQ9NZJ0 730 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 CD84Q9UIB8 345 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 MOSPD1Q9UJG1 213 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 PADI4Q9UM07 663 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 PHTF1Q9UMS5 762 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 GPR34Q9UPC5 381 aa13.77□□□□□ -0.21
SCAF1-203ENST00000598359 KALRNO60229 2985 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 GOLGA6CA6NDK9 693 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 GOLGA6BA6NDN3 693 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 ARHGAP6O43182 974 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 USP12O75317 370 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 TNFP01375 233 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 HLA-DQB2P05538 268 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 GOLGA6DP0CG33 693 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 ITPKBP27987 946 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 MAN1A1P33908 653 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 TRIM23P36406 574 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 BLKP51451 505 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 NIPAL4Q0D2K0 466 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 ESRP1Q6NXG1 681 aaKnown RBP13.76□□□□□ -0.21
SCAF1-203ENST00000598359 NPNTQ6UXI9 565 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 Q6ZVL8 140 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 LRRC49Q8IUZ0 686 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 MAP7D3Q8IWC1 876 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 FSTL5Q8N475 847 aaPredicted RBP13.76□□□□□ -0.21
SCAF1-203ENST00000598359 CCNYQ8ND76 341 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 CCL4L1Q8NHW4 92 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 PTCD2Q8WV60 388 aaKnown RBP13.76□□□□□ -0.21
SCAF1-203ENST00000598359 SPOCK2Q92563 424 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 GLMNQ92990 594 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 DTD2Q96FN9 168 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 SCRN2Q96FV2 425 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 RNF157Q96PX1 679 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 DEPDC7Q96QD5 511 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 LGMNQ99538 433 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 POLR1EQ9GZS1 481 aaKnown RBP13.76□□□□□ -0.21
SCAF1-203ENST00000598359 TMEM168Q9H0V1 697 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 CYP4F12Q9HCS2 524 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 GOLGA6AQ9NYA3 693 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 RABGEF1Q9UJ41 708 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 TFR2Q9UP52 801 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 CHKBQ9Y259 395 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 HEY1Q9Y5J3 304 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 KNTC1P50748 2209 aa13.76□□□□□ -0.21
SCAF1-203ENST00000598359 A0A1W2PNU3 283 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-203ENST00000598359 A0A1W2PQ67 120 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 PMS2P1A4D2B8 440 aa13.75□□□□□ -0.21
SCAF1-203ENST00000598359 C3orf70A6NLC5 250 aaPredicted RBP13.75□□□□□ -0.21
SCAF1-203ENST00000598359 AKR1B15C9JRZ8 316 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 269.9 ms