RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 FUCA1P04066 466 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 HOXC4P09017 264 aaPredicted RBP10.54□□□□□ -0.72
LSM4-205ENST00000597776 MYCLP1P12525 358 aaPredicted RBP10.54□□□□□ -0.72
LSM4-205ENST00000597776 SKILP12757 684 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 LHCGRP22888 699 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 AMPD1P23109 780 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 VIPR1P32241 457 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 ANP32AP39687 249 aaKnown RBP10.54□□□□□ -0.72
LSM4-205ENST00000597776 ETV5P41161 510 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 ETV3P41162 512 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 HCAR3P49019 387 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 RENBPP51606 427 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 MAXP61244 160 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 ZFP36L1Q07352 338 aaKnown RBP10.54□□□□□ -0.72
LSM4-205ENST00000597776 ARHGEF7Q14155 803 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 ANO6Q4KMQ2 910 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 PHF19Q5T6S3 580 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 TXNRD3NBQ6F5E7 133 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 HSD11B1LQ7Z5J1 315 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 HEATR4Q86WZ0 1026 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 PSTKQ8IV42 348 aaKnown RBP10.54□□□□□ -0.72
LSM4-205ENST00000597776 PTCD2Q8WV60 388 aaKnown RBP10.54□□□□□ -0.72
LSM4-205ENST00000597776 SEMA6CQ9H3T2 930 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 ZWILCHQ9H900 591 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 CARS2Q9HA77 564 aaKnown RBP10.54□□□□□ -0.72
LSM4-205ENST00000597776 RDH14Q9HBH5 336 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 NOD2Q9HC29 1040 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.54□□□□□ -0.72
LSM4-205ENST00000597776 SPATS2LQ9NUQ6 558 aaKnown RBP10.54□□□□□ -0.72
LSM4-205ENST00000597776 AIPL1Q9NZN9 384 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 FOXJ2Q9P0K8 574 aa10.54□□□□□ -0.72
LSM4-205ENST00000597776 PRAMEF33A0A0G2JMD5 474 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.53□□□□□ -0.72
LSM4-205ENST00000597776 GOLGA6CA6NDK9 693 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 GOLGA6BA6NDN3 693 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 CAPN8A6NHC0 703 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 NPIPB15A6NHN6 443 aaPredicted RBP10.53□□□□□ -0.72
LSM4-205ENST00000597776 J3QKU1 62 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 MAFKO60675 156 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 PRAMEF10O60809 474 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 SOCS5O75159 536 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 CEACAM5P06731 702 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 GOLGA6DP0CG33 693 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 GZMAP12544 262 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 CCNB1P14635 433 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 CR2P20023 1033 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 AK4P27144 223 aaPredicted RBP10.53□□□□□ -0.72
LSM4-205ENST00000597776 PRKCIP41743 596 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 GNPDA1P46926 289 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 POLD2P49005 469 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 MAPK10P53779 464 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 OR1D5P58170 312 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 B4GALNT1Q00973 533 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 KLHL30Q0D2K2 578 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 TRAF2Q12933 501 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 DPYSL2Q16555 572 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 AMZ1Q400G9 498 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 MAP9Q49MG5 647 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 TMCO3Q6UWJ1 677 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 RFLNAQ6ZTI6 216 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 POLNQ7Z5Q5 900 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 TSPAN33Q86UF1 283 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 VASH2Q86V25 355 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 ZFAND4Q86XD8 727 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 NRROSQ86YC3 692 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 SLITRK4Q8IW52 837 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 LZTR1Q8N653 840 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 PATE1Q8WXA2 126 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 DTD2Q96FN9 168 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 MED8Q96G25 268 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 BTBD6Q96KE9 485 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 ZNF599Q96NL3 588 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 NAP1L5Q96NT1 182 aaPredicted RBP10.53□□□□□ -0.72
LSM4-205ENST00000597776 CSPG4P5Q96PW8 444 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 SMIM14Q96QK8 99 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 NUDCD1Q96RS6 583 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 MGME1Q9BQP7 344 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 TEX101Q9BY14 249 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 FRMD8Q9BZ67 464 aaPredicted RBP10.53□□□□□ -0.72
LSM4-205ENST00000597776 PHPT1Q9NRX4 125 aaPredicted RBP10.53□□□□□ -0.72
LSM4-205ENST00000597776 GOLGA6AQ9NYA3 693 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 TMEM63CQ9P1W3 806 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 ST14Q9Y5Y6 855 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 SCINQ9Y6U3 715 aa10.53□□□□□ -0.72
LSM4-205ENST00000597776 SCN8AQ9UQD0 1980 aa10.52□□□□□ -0.72
LSM4-205ENST00000597776 B8ZZF3 427 aa10.52□□□□□ -0.73
LSM4-205ENST00000597776 PDE2AO00408 941 aaPredicted RBP10.52□□□□□ -0.73
LSM4-205ENST00000597776 NVLO15381 856 aaKnown RBP10.52□□□□□ -0.73
LSM4-205ENST00000597776 B4GAT1O43505 415 aa10.52□□□□□ -0.73
LSM4-205ENST00000597776 NUDT21O43809 227 aaKnown RBP10.52□□□□□ -0.73
LSM4-205ENST00000597776 ECEL1O95672 775 aa10.52□□□□□ -0.73
LSM4-205ENST00000597776 FGF1P05230 155 aa10.52□□□□□ -0.73
LSM4-205ENST00000597776 RARAP10276 462 aa10.52□□□□□ -0.73
LSM4-205ENST00000597776 PNLIPP16233 465 aa10.52□□□□□ -0.73
LSM4-205ENST00000597776 CTPS1P17812 591 aa10.52□□□□□ -0.73
LSM4-205ENST00000597776 ALDH4A1P30038 563 aa10.52□□□□□ -0.73
LSM4-205ENST00000597776 PCK1P35558 622 aa10.52□□□□□ -0.73
LSM4-205ENST00000597776 ARL4AP40617 200 aa10.52□□□□□ -0.73
LSM4-205ENST00000597776 ZNF135P52742 658 aaPredicted RBP10.52□□□□□ -0.73
LSM4-205ENST00000597776 CDK3Q00526 305 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms