RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 MS4A14Q96JA4 679 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 MRGPRX2Q96LB1 330 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 BMFQ96LC9 184 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 WDR24Q96S15 920 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 NAPGQ99747 312 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 GAREM1Q9H706 876 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 KCND1Q9NSA2 647 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 HOMER3Q9NSC5 361 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 KCTD5Q9NXV2 234 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 GOLGA6AQ9NYA3 693 aa19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 AAR2Q9Y312 384 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-214ENST00000597396 SPTBN2O15020 2390 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 C1orf232A0A0U1RR37 186 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 C4orf47A7E2U8 309 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 CDX4O14627 284 aaPredicted RBP19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 PCCBP05166 539 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 ITGAVP06756 1048 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 TCP1P17987 556 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 RABIFP47224 123 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 LIMK1P53667 647 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 NXPH1P58417 271 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 WSCD2Q2TBF2 565 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 HLA-BQ31612 363 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 P3H1Q32P28 736 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 UAP1L1Q3KQV9 507 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 DRICH1Q6PGQ1 229 aaPredicted RBP19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 Q6ZSR6 202 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 HSD11B1LQ7Z5J1 315 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 SLC25A41Q8N5S1 370 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 CCDC89Q8N998 374 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 COG1Q8WTW3 980 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 LRRC45Q96CN5 670 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 RTP4Q96DX8 246 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 NUS1Q96E22 293 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 COQ10AQ96MF6 247 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 LYSMD1Q96S90 227 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 FICDQ9BVA6 458 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 MBNL1Q9NR56 388 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 TTC7AQ9ULT0 858 aaPredicted RBP19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 SCN8AQ9UQD0 1980 aa19.68■□□□□ 0.74
SHKBP1-214ENST00000597396 A0A0U1RQS6 177 aa19.67■□□□□ 0.74
SHKBP1-214ENST00000597396 CTAGE9A4FU28 777 aa19.67■□□□□ 0.74
SHKBP1-214ENST00000597396 CES2O00748 559 aa19.67■□□□□ 0.74
SHKBP1-214ENST00000597396 CLDN7O95471 211 aa19.67■□□□□ 0.74
SHKBP1-214ENST00000597396 EPOP01588 193 aa19.67■□□□□ 0.74
SHKBP1-214ENST00000597396 PIRTP0C851 137 aa19.67■□□□□ 0.74
SHKBP1-214ENST00000597396 HLA-DPA1P20036 260 aa19.67■□□□□ 0.74
SHKBP1-214ENST00000597396 PARP6Q2NL67 630 aa19.67■□□□□ 0.74
SHKBP1-214ENST00000597396 DCP2Q8IU60 420 aaKnown RBP19.67■□□□□ 0.74
SHKBP1-214ENST00000597396 CCHCR1Q8TD31 782 aa19.67■□□□□ 0.74
SHKBP1-214ENST00000597396 DTD2Q96FN9 168 aa19.67■□□□□ 0.74
SHKBP1-214ENST00000597396 GORASP1Q9BQQ3 440 aa19.67■□□□□ 0.74
SHKBP1-214ENST00000597396 DRG1Q9Y295 367 aaKnown RBP19.67■□□□□ 0.74
SHKBP1-214ENST00000597396 LAMA1P25391 3075 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 LOC285095A0A1B0GVY8 99 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 FGF1P05230 155 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 C1SP09871 688 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 GM2AP17900 193 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 ETV3P41162 512 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 STC1P52823 247 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 THOP1P52888 689 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 MTM1Q13496 603 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 ZNF423Q2M1K9 1284 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 SIRPB2Q5JXA9 342 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 Q6ZVL8 140 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 GSTA5Q7RTV2 222 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 LYSMD3Q7Z3D4 306 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 SPATS2Q86XZ4 545 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 OXR1Q8N573 874 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 TAB3Q8N5C8 712 aaPredicted RBP19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 PRELID2Q8N945 189 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 ACTRT1Q8TDG2 376 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 SRPK1Q96SB4 655 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 GPR63Q9BZJ6 419 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 MAGEE1Q9HCI5 957 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 SMARCAL1Q9NZC9 954 aa19.66■□□□□ 0.74
SHKBP1-214ENST00000597396 MYLKQ15746 1914 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 TOR1BO14657 336 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 SLC30A4O14863 429 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 ZNF185O15231 689 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 DFNA5O60443 496 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 METTL18O95568 372 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 AGTP01019 485 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 SLC4A1P02730 911 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 ATXN1LP0C7T5 689 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 CHRNA4P43681 627 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 KCNJ1P48048 391 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 PFN3P60673 137 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 YPEL5P62699 121 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 PTSQ03393 145 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 PDE1CQ14123 709 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 SLC1A5Q15758 541 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 PRAMEF14Q5SWL7 426 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 FAXCQ5TGI0 409 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 KDM7AQ6ZMT4 941 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 CBARPQ8N350 705 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 TRIM44Q96DX7 344 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 ELF4Q99607 663 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 AP1M1Q9BXS5 423 aa19.65■□□□□ 0.74
SHKBP1-214ENST00000597396 ERVMER34-1Q9H9K5 563 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms