RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 NFATC4Q14934 902 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 ACOX1Q15067 660 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 NOMO1Q15155 1222 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 CDKN3Q16667 212 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 PROX2Q3B8N5 592 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 TEX44Q53QW1 395 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 LRRC66Q68CR7 880 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 DENND2CQ68D51 928 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 ESRP1Q6NXG1 681 aaKnown RBP11□□□□□ -0.65
SHKBP1-206ENST00000595523 USP45Q70EL2 814 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 TECPR1Q7Z6L1 1165 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 ZC3H18Q86VM9 953 aaKnown RBP11□□□□□ -0.65
SHKBP1-206ENST00000595523 CHCHD4Q8N4Q1 142 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 ZNF548Q8NEK5 533 aaPredicted RBP11□□□□□ -0.65
SHKBP1-206ENST00000595523 LPCAT1Q8NF37 534 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 OR4C6Q8NH72 309 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 SPATA22Q8NHS9 363 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 TFB1MQ8WVM0 346 aaKnown RBP11□□□□□ -0.65
SHKBP1-206ENST00000595523 ADAMTS14Q8WXS8 1223 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 P3H4Q92791 437 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 NUS1Q96E22 293 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 DTD2Q96FN9 168 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 CNDP2Q96KP4 475 aaKnown RBP11□□□□□ -0.65
SHKBP1-206ENST00000595523 TEKT5Q96M29 485 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 APOOQ9BUR5 198 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 SCNM1Q9BWG6 230 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 LGR4Q9BXB1 951 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 OSBPL8Q9BZF1 889 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 SLC25A51Q9H1U9 297 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 C10orf88Q9H8K7 445 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 PCDH9Q9HC56 1237 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 ANGPTL2Q9UKU9 493 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 EFR3BQ9Y2G0 817 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 CACNA1BQ00975 2339 aa11□□□□□ -0.65
SHKBP1-206ENST00000595523 KIF26BQ2KJY2 2108 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 ZFHX4Q86UP3 3567 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 UNC13CQ8NB66 2214 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 LY6G6EA0A0G2JKS1 128 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 TMEM202A6NGA9 273 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 PSMD11O00231 422 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 ENC1O14682 589 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 SCAMP1O15126 338 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 FFAR2O15552 330 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 ARHGAP6O43182 974 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 GCATO75600 419 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 LDOC1O95751 146 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 MT-CYBP00156 380 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 SOD1P00441 154 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 CELA2BP08218 269 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 C1SP09871 688 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 JUNDP17535 347 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 ACADVLP49748 655 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 RPL26P61254 145 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 HNRNPKP61978 463 aaKnown RBP eCLIP10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 OTUD4Q01804 1114 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 PTSQ03393 145 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 ZNF211Q13398 564 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 PTK2BQ14289 1009 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 QPCTQ16769 361 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 ALG11Q2TAA5 492 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 PNCKQ6P2M8 343 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 Q6ZVL8 140 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 BZW1Q7L1Q6 419 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 PEX26Q7Z412 305 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 LRRC8AQ8IWT6 810 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 PHACTR4Q8IZ21 702 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 ACTL9Q8TC94 416 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 PDXPQ96GD0 296 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 HES6Q96HZ4 224 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 LYSMD1Q96S90 227 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 FAM118BQ9BPY3 351 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 LRRC61Q9BV99 259 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 TMEM121BQ9BXQ6 578 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 GLOD4Q9HC38 313 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 HAUS2Q9NVX0 235 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 APOBEC3BQ9UH17 382 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 KLK13Q9UKR3 277 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 AMFRQ9UKV5 643 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 RPL26L1Q9UNX3 145 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 U3KQA8 63 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 PKD1L2Q7Z442 2459 aa10.99□□□□□ -0.65
SHKBP1-206ENST00000595523 MIF4GDA9UHW6 222 aaKnown RBP10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 HACD1B0YJ81 288 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 ANKRD66B4E2M5 251 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 CLDN7O95471 211 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 ZNF30P17039 623 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 NFKB1P19838 968 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 CA4P22748 312 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 RBL1P28749 1068 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 STC1P52823 247 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 EPHB1P54762 984 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 KIAA1024LP59773 190 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 XRCC4Q13426 336 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 ARHGEF7Q14155 803 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 GALNT3Q14435 633 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 SLC14A2Q15849 920 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 KDELC1Q6UW63 502 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 KDELC2Q7Z4H8 507 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 SYCE1Q8N0S2 351 aa10.98□□□□□ -0.65
SHKBP1-206ENST00000595523 ZNF567Q8N184 647 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms