RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 POLR3BQ9NW08 1133 aaPredicted RBP15.2■□□□□ 0.02
VRK3-207ENST00000594092 GOLGA8RI6L899 631 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 STX7O15400 261 aaKnown RBP15.2■□□□□ 0.02
VRK3-207ENST00000594092 TYROBPO43914 113 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 ZWINTO95229 277 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 GOT2P00505 430 aaKnown RBP15.2■□□□□ 0.02
VRK3-207ENST00000594092 ITGA2BP08514 1039 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 GABRB3P28472 473 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 CTHP32929 405 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 SPRP35270 261 aaPredicted RBP15.2■□□□□ 0.02
VRK3-207ENST00000594092 IL12RB1P42701 662 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 MPP1Q00013 466 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 MPP2Q14168 576 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 LRRC14Q15048 493 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 SMAD2Q15796 467 aaKnown RBP15.2■□□□□ 0.02
VRK3-207ENST00000594092 CDKN3Q16667 212 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 BRAT1Q6PJG6 821 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 TXNDC11Q6PKC3 985 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 TAX1BP1Q86VP1 789 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 SUGP1Q8IWZ8 645 aaKnown RBP15.2■□□□□ 0.02
VRK3-207ENST00000594092 STK40Q8N2I9 435 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 C2CD4AQ8NCU7 369 aaPredicted RBP15.2■□□□□ 0.02
VRK3-207ENST00000594092 CALML6Q8TD86 181 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 SCRN2Q96FV2 425 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 LYSMD1Q96S90 227 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 SRPK1Q96SB4 655 aaKnown RBP15.2■□□□□ 0.02
VRK3-207ENST00000594092 ACOX2Q99424 681 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 KLF6Q99612 283 aaPredicted RBP15.2■□□□□ 0.02
VRK3-207ENST00000594092 OSBPL1AQ9BXW6 950 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 ZDHHC4Q9NPG8 344 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 IL17CQ9P0M4 197 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 FBXO5Q9UKT4 447 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 STARD13Q9Y3M8 1113 aa15.2■□□□□ 0.02
VRK3-207ENST00000594092 TCF20Q9UGU0 1960 aaKnown RBP15.19■□□□□ 0.02
VRK3-207ENST00000594092 COL4A2P08572 1712 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 C1orf232A0A0U1RR37 186 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 TSPAN11A1L157 253 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 SPECC1L-ADORA2AF8WAN1 911 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 AHSGP02765 367 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 HMGCLP35914 325 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 ABCG1P45844 678 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 LIMK2P53671 638 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 DNAJC3Q13217 504 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 TIFABQ6ZNK6 161 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 KIAA0408Q6ZU52 694 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 SH2D5Q6ZV89 423 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 ZNF771Q7L3S4 317 aaPredicted RBP15.19■□□□□ 0.02
VRK3-207ENST00000594092 DEFB123Q8N688 67 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 BANPQ8N9N5 519 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 APOPT1Q96IL0 206 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 MCCC1Q96RQ3 725 aaPredicted RBP15.19■□□□□ 0.02
VRK3-207ENST00000594092 CCDC134Q9H6E4 229 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 ZFYVE1Q9HBF4 777 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 BPIFA1Q9NP55 256 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 MLXIPLQ9NP71 852 aa15.19■□□□□ 0.02
VRK3-207ENST00000594092 MARCH4Q9P2E8 410 aaPredicted RBP15.19■□□□□ 0.02
VRK3-207ENST00000594092 GMNCA6NCL1 334 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 NPIPB15A6NHN6 443 aaPredicted RBP15.18■□□□□ 0.02
VRK3-207ENST00000594092 RFPL1O75677 317 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 CLDN7O95471 211 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 ASGR2P07307 311 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 PYGBP11216 843 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 HNRNPLP14866 589 aaKnown RBP eCLIP15.18■□□□□ 0.02
VRK3-207ENST00000594092 RPA3P35244 121 aaPredicted RBP15.18■□□□□ 0.02
VRK3-207ENST00000594092 TNFRSF4P43489 277 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 POLR2LP62875 67 aaKnown RBP15.18■□□□□ 0.02
VRK3-207ENST00000594092 SLC18A2Q05940 514 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 SEPT7Q16181 437 aaKnown RBP15.18■□□□□ 0.02
VRK3-207ENST00000594092 UGP2Q16851 508 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 LEXMQ3ZCV2 418 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 ZNF805Q5CZA5 627 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 TPRG1Q6ZUI0 275 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 USP45Q70EL2 814 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 TSPAN33Q86UF1 283 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 ZC3HC1Q86WB0 502 aaKnown RBP15.18■□□□□ 0.02
VRK3-207ENST00000594092 CILP2Q8IUL8 1156 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 LMNTD2Q8IXW0 634 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 NDUFAF2Q8N183 169 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 OR4L1Q8NH43 312 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 GABPB2Q8TAK5 448 aaPredicted RBP15.18■□□□□ 0.02
VRK3-207ENST00000594092 BCAS4Q8TDM0 211 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 EZH1Q92800 747 aaPredicted RBP15.18■□□□□ 0.02
VRK3-207ENST00000594092 ATXN7L3BQ96GX2 97 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 RHOJQ9H4E5 214 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 CACNA2D2Q9NY47 1150 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 FKBPLQ9UIM3 349 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 SARDHQ9UL12 918 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 PKP3Q9Y446 797 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 F5P12259 2224 aa15.18■□□□□ 0.02
VRK3-207ENST00000594092 A8MX80 341 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 K7EQS6 105 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 TM9SF1O15321 606 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 PRNPP04156 253 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 HADHAP40939 763 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 IL9RQ01113 521 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 SEMG2Q02383 582 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 ELAVL3Q14576 367 aaKnown RBP15.17■□□□□ 0.02
VRK3-207ENST00000594092 LRRC73Q5JTD7 316 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 FSTL4Q6MZW2 842 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 AFTPHQ6ULP2 937 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms