RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 MPP2Q14168 576 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 C9orf64Q5T6V5 341 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 FSTL4Q6MZW2 842 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 GPR153Q6NV75 609 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 SERPINA13PQ6UXR4 307 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 GALNT7Q86SF2 657 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 CILP2Q8IUL8 1156 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 NDUFAF2Q8N183 169 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 PLCD3Q8N3E9 789 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 GPR150Q8NGU9 434 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 ALKBH8Q96BT7 664 aaKnown RBP20.81■□□□□ 0.92
PNKP-203ENST00000593946 VPS39Q96JC1 886 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 KLF6Q99612 283 aaPredicted RBP20.81■□□□□ 0.92
PNKP-203ENST00000593946 ZFYVE1Q9HBF4 777 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 KCNK9Q9NPC2 374 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 SMG5Q9UPR3 1016 aaKnown RBP20.81■□□□□ 0.92
PNKP-203ENST00000593946 STARD13Q9Y3M8 1113 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 C1orf232A0A0U1RR37 186 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 NPIPB15A6NHN6 443 aaPredicted RBP20.81■□□□□ 0.92
PNKP-203ENST00000593946 H7C0S8 307 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 GOLGA8RI6L899 631 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 STX7O15400 261 aaKnown RBP20.81■□□□□ 0.92
PNKP-203ENST00000593946 PYGBP11216 843 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 HADHAP40939 763 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 CCNFP41002 786 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 GALK1P51570 392 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 SLC18A1P54219 525 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 POLR2LP62875 67 aaKnown RBP20.81■□□□□ 0.92
PNKP-203ENST00000593946 PPARDQ03181 441 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 USP45Q70EL2 814 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 BANPQ8N9N5 519 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 HCAR2Q8TDS4 363 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 ISL2Q96A47 359 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 SGSM3Q96HU1 749 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 P2RY13Q9BPV8 354 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 MARCH4Q9P2E8 410 aaPredicted RBP20.81■□□□□ 0.92
PNKP-203ENST00000593946 DKK3Q9UBP4 350 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 LIMD1Q9UGP4 676 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 PKP3Q9Y446 797 aa20.81■□□□□ 0.92
PNKP-203ENST00000593946 ANTXRLA6NF34 631 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 FAM47DPA6NHR8 397 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 SPAG7O75391 227 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 FOSL2P15408 326 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 CHN1P15882 459 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 CTHP32929 405 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 MDH1P40925 334 aaKnown RBP20.8■□□□□ 0.92
PNKP-203ENST00000593946 IL12RB1P42701 662 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 ZNF805Q5CZA5 627 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 EGFLAMQ63HQ2 1017 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 AFTPHQ6ULP2 937 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 TPRG1Q6ZUI0 275 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 SLC44A3Q8N4M1 653 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 DCLK2Q8N568 766 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 OR4L1Q8NH43 312 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 HLA-CQ95604 372 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 ATXN7L3BQ96GX2 97 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 GUCD1Q96NT3 240 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 GPR22Q99680 433 aa20.8■□□□□ 0.92
PNKP-203ENST00000593946 SPECC1L-ADORA2AF8WAN1 911 aa20.79■□□□□ 0.92
PNKP-203ENST00000593946 HNRNPLP14866 589 aaKnown RBP eCLIP20.79■□□□□ 0.92
PNKP-203ENST00000593946 ABCG1P45844 678 aa20.79■□□□□ 0.92
PNKP-203ENST00000593946 LEPRP48357 1165 aaKnown RBP20.79■□□□□ 0.92
PNKP-203ENST00000593946 GUCY1A3Q02108 690 aa20.79■□□□□ 0.92
PNKP-203ENST00000593946 ENPP2Q13822 863 aa20.79■□□□□ 0.92
PNKP-203ENST00000593946 ELAVL3Q14576 367 aaKnown RBP20.79■□□□□ 0.92
PNKP-203ENST00000593946 SMAD2Q15796 467 aaKnown RBP20.79■□□□□ 0.92
PNKP-203ENST00000593946 STK40Q8N2I9 435 aa20.79■□□□□ 0.92
PNKP-203ENST00000593946 OR8D1Q8WZ84 308 aa20.79■□□□□ 0.92
PNKP-203ENST00000593946 CAPS2Q9BXY5 557 aa20.79■□□□□ 0.92
PNKP-203ENST00000593946 BPIFA1Q9NP55 256 aa20.79■□□□□ 0.92
PNKP-203ENST00000593946 CATSPERZQ9NTU4 200 aa20.79■□□□□ 0.92
PNKP-203ENST00000593946 FKBPLQ9UIM3 349 aa20.79■□□□□ 0.92
PNKP-203ENST00000593946 MTO1Q9Y2Z2 717 aaKnown RBP20.79■□□□□ 0.92
PNKP-203ENST00000593946 TPP1O14773 563 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 CD3EAPO15446 510 aaKnown RBP20.78■□□□□ 0.92
PNKP-203ENST00000593946 CLDN7O95471 211 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 PRNPP04156 253 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 MAGEA12P43365 314 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 TNFRSF4P43489 277 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 CD151P48509 253 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 MRNIPQ6NTE8 343 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 TXNDC11Q6PKC3 985 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 CRTC1Q6UUV9 634 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 TSPAN33Q86UF1 283 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 OTUD6BQ8N6M0 293 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 TMIEQ8NEW7 156 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 ACMSDQ8TDX5 336 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 PPM1EQ8WY54 764 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 EZH1Q92800 747 aaPredicted RBP20.78■□□□□ 0.92
PNKP-203ENST00000593946 APOPT1Q96IL0 206 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 ACOX2Q99424 681 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 FBXO6Q9NRD1 293 aaPredicted RBP20.78■□□□□ 0.92
PNKP-203ENST00000593946 MKS1Q9NXB0 559 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 K7EQS6 105 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 HAUS5O94927 633 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 OGNP20774 298 aaKnown RBP20.78■□□□□ 0.92
PNKP-203ENST00000593946 FOXN2P32314 431 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 PEX6Q13608 980 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 ZNF789Q5FWF6 425 aa20.78■□□□□ 0.92
PNKP-203ENST00000593946 DENND1AQ8TEH3 1009 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms