RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 FZD6O60353 706 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 ZNF189O75820 626 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-227ENST00000591849 PIAS2O75928 621 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 KRT37O76014 449 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 RASGRP1O95267 797 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 TNFP01375 233 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 TRBC1P01850 177 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 CSF2P04141 144 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 FTH1P19P0C7X4 201 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 RBP3P10745 1247 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 ZNF30P17039 623 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 RBL1P28749 1068 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 ETV3P41162 512 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 GPR1P46091 355 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 CDK18Q07002 472 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 PRPSAP1Q14558 356 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 NFATC4Q14934 902 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 AGERQ15109 404 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 NOMO1Q15155 1222 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 PTPRRQ15256 657 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 RPS6KA1Q15418 735 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 LRRC66Q68CR7 880 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 ITPRIPL1Q6GPH6 555 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 RAET1GQ6H3X3 334 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 PNCKQ6P2M8 343 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 CRTC1Q6UUV9 634 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 KDM7AQ6ZMT4 941 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 MACC1Q6ZN28 852 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 Q6ZVL8 140 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 HSD11B1LQ7Z5J1 315 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 TSPAN33Q86UF1 283 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 PHACTR4Q8IZ21 702 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 SLC22A18ASQ8N1D0 253 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 PNPLA1Q8N8W4 532 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 SPATA22Q8NHS9 363 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 ACTL9Q8TC94 416 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 SCG3Q8WXD2 468 aaKnown RBP10.08□□□□□ -0.8
BRCA1-227ENST00000591849 SPOCK2Q92563 424 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 ALG3Q92685 438 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 TSACCQ96A04 125 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-227ENST00000591849 LRRC45Q96CN5 670 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 IMP4Q96G21 291 aaKnown RBP10.08□□□□□ -0.8
BRCA1-227ENST00000591849 COQ10AQ96MF6 247 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 WDR92Q96MX6 357 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 QKIQ96PU8 341 aaKnown RBP eCLIP10.08□□□□□ -0.8
BRCA1-227ENST00000591849 WDR26Q9H7D7 661 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 PHPT1Q9NRX4 125 aaPredicted RBP10.08□□□□□ -0.8
BRCA1-227ENST00000591849 UBP1Q9NZI7 540 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 PKD2L2Q9NZM6 624 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 KLQ9UEF7 1012 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 APOBEC3BQ9UH17 382 aaKnown RBP10.08□□□□□ -0.8
BRCA1-227ENST00000591849 FAM153AQ9UHL3 310 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 RSPH14Q9UHP6 348 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 TRHDEQ9UKU6 1024 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 PPIL1Q9Y3C6 166 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 CACNA1EQ15878 2313 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 IGF2RP11717 2491 aa10.08□□□□□ -0.8
BRCA1-227ENST00000591849 ADAMTS9Q9P2N4 1935 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 PCDH15Q96QU1 1955 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 NYNRINQ9P2P1 1898 aaKnown RBP10.07□□□□□ -0.8
BRCA1-227ENST00000591849 C1orf232A0A0U1RR37 186 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 CAPN8A6NHC0 703 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 ANKRD66B4E2M5 251 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 KCNN4O15554 427 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 AQP9O43315 295 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 CBFA2T3O75081 653 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 CLDN7O95471 211 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 SLC4A1P02730 911 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 ANXA6P08133 673 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 ATXN1LP0C7T5 689 aaKnown RBP10.07□□□□□ -0.8
BRCA1-227ENST00000591849 NME1P15531 152 aaKnown RBP10.07□□□□□ -0.8
BRCA1-227ENST00000591849 TSHRP16473 764 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 NFKB1P19838 968 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 PTPN7P35236 360 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 DUSP3P51452 185 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-227ENST00000591849 SRP54P61011 504 aaKnown RBP10.07□□□□□ -0.8
BRCA1-227ENST00000591849 SHC2P98077 582 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 WASHC5Q12768 1159 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 EIF2B5Q13144 721 aaKnown RBP10.07□□□□□ -0.8
BRCA1-227ENST00000591849 C1orf61Q13536 156 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 GALNT3Q14435 633 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 QPCTQ16769 361 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 PRRT3Q5FWE3 981 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 FAM182AQ5T1J6 154 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 AADACL2Q6P093 401 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 ZNF567Q8N184 647 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 CHCHD4Q8N4Q1 142 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 PLA2G15Q8NCC3 412 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 GLMNQ92990 594 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 DTD2Q96FN9 168 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 MCCC1Q96RQ3 725 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-227ENST00000591849 SRPK1Q96SB4 655 aaKnown RBP10.07□□□□□ -0.8
BRCA1-227ENST00000591849 FAM118BQ9BPY3 351 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 DUSP23Q9BVJ7 150 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 FSD1LQ9BXM9 530 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 GPR63Q9BZJ6 419 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 SUDS3Q9H7L9 328 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-227ENST00000591849 C10orf88Q9H8K7 445 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 UCKL1Q9NWZ5 548 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 CD84Q9UIB8 345 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms