RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 CREBZFQ9NS37 354 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 FAM237BA0A1B0GVD1 139 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 TRIM43BA6NCK2 446 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 SLC25A14O95258 325 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 C22orf31O95567 290 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 C1RP00736 705 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 SHBGP04278 402 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 COX7A2P14406 83 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 FLT3P36888 993 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 FMO1Q01740 532 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 GRB14Q14449 540 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 ARSHQ5FYA8 562 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 ZNF549Q6P9A3 640 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 TXNDC11Q6PKC3 985 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 ZNF621Q6ZSS3 439 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 BAP1Q92560 729 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 USP7Q93009 1102 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 EXOC2Q96KP1 924 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 ACP6Q9NPH0 428 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 RNASEH2AO75792 299 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 GOT1P17174 413 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 BST1Q10588 318 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 UBXN2BQ14CS0 331 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 PMF1Q6P1K2 205 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 DET1Q7L5Y6 550 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 LNX1Q8TBB1 728 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 RERGQ96A58 199 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 COPS8Q99627 209 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 UNKQ9C0B0 810 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 SEMA6AQ9H2E6 1030 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 HBS1LQ9Y450 684 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 TRAFD1O14545 582 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 PER2O15055 1255 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 CILPO75339 1184 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 CALCAP01258 141 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 SPIDRQ14159 915 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 PARP15Q460N3 678 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 OR52K1Q8NGK4 314 aa13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 MRPL39Q9NYK5 338 aaKnown RBP13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 HECAQ9UBI9 543 aaPredicted RBP13.34□□□□□ -0.27
SMARCA4-216ENST00000591545 ISM1B1AKI9 464 aa13.33□□□□□ -0.27
SMARCA4-216ENST00000591545 WASP42768 502 aa13.33□□□□□ -0.27
SMARCA4-216ENST00000591545 NAGLUP54802 743 aa13.33□□□□□ -0.27
SMARCA4-216ENST00000591545 ECM1Q16610 540 aa13.33□□□□□ -0.27
SMARCA4-216ENST00000591545 C16orf46Q6P387 395 aa13.33□□□□□ -0.27
SMARCA4-216ENST00000591545 PCDH20Q8N6Y1 951 aaKnown RBP13.33□□□□□ -0.27
SMARCA4-216ENST00000591545 MYO19Q96H55 970 aa13.33□□□□□ -0.27
SMARCA4-216ENST00000591545 TCF12Q99081 682 aa13.33□□□□□ -0.27
SMARCA4-216ENST00000591545 ATP6V1HQ9UI12 483 aa13.33□□□□□ -0.27
SMARCA4-216ENST00000591545 ALOX15BO15296 676 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 SGTAO43765 313 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 COL6A1P12109 1028 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 YBEYP58557 167 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 LILRA4P59901 499 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 ARHGAP1Q07960 439 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 VN1R5Q7Z5H4 357 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 EBNA1BP2Q99848 306 aaKnown RBP13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 SPATA5L1Q9BVQ7 753 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 RHBGQ9H310 441 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 PRKAG3Q9UGI9 489 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 TLL2Q9Y6L7 1015 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 STON1Q9Y6Q2 735 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 IGLV3-22A0A075B6J6 115 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 SLC28A1O00337 649 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 NUDT14O95848 222 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 IFNA16P05015 189 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 GSTM5P46439 218 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 DNAJC14Q6Y2X3 702 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 CYP4X1Q8N118 509 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 RNF186Q9NXI6 227 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 GULP1Q9UBP9 304 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 AGRPO00253 132 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 TACR2P21452 398 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 CCND3P30281 292 aaPredicted RBP13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 NTSP30990 170 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 HTR7P34969 479 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 PSMD8P48556 350 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 SLC25A3Q00325 362 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 CFAP52Q8N1V2 620 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 HERVK_113Q902F9 699 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 SEMA4DQ92854 862 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 ADI1Q9BV57 179 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 ARHGEF4Q9NR80 690 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 CLN6Q9NWW5 311 aa13.33□□□□□ -0.28
SMARCA4-216ENST00000591545 hCG_1818297A0A087WSY0 165 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 CCDC189A1A4V9 331 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 TULP2O00295 520 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 ACSL4O60488 711 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 CBFA2T3O75081 653 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 ZSCAN5DPP0CG00 497 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 CTPS1P17812 591 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 BMP6P22004 513 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 ADRA1BP35368 520 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 GRIA3P42263 894 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 CLK2P49760 499 aaKnown RBP13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 TAF5Q15542 800 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 LIPMQ5VYY2 423 aa13.32□□□□□ -0.28
SMARCA4-216ENST00000591545 NEK5Q6P3R8 708 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms