RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 CIB1Q99828 191 aa12.4□□□□□ -0.42
PDE4A-207ENST00000590407 YTHDF1Q9BYJ9 559 aaKnown RBP12.4□□□□□ -0.42
PDE4A-207ENST00000590407 SIK2Q9H0K1 926 aa12.4□□□□□ -0.42
PDE4A-207ENST00000590407 CAAP1Q9H8G2 361 aa12.4□□□□□ -0.42
PDE4A-207ENST00000590407 SDR39U1Q9NRG7 319 aaPredicted RBP12.4□□□□□ -0.42
PDE4A-207ENST00000590407 FAM105AQ9NUU6 356 aa12.4□□□□□ -0.42
PDE4A-207ENST00000590407 DDX18Q9NVP1 670 aaKnown RBP12.4□□□□□ -0.42
PDE4A-207ENST00000590407 GALNT8Q9NY28 637 aa12.4□□□□□ -0.42
PDE4A-207ENST00000590407 MAP10Q9P2G4 905 aa12.4□□□□□ -0.42
PDE4A-207ENST00000590407 Q9Y3F1 56 aa12.4□□□□□ -0.42
PDE4A-207ENST00000590407 A0A0J9YVX5 310 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 A0A0J9YYE9 177 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 A0A1B0GTW7 788 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 DHRS12A0PJE2 317 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 ZNF839A8K0R7 811 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 FXYD1O00168 92 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 DLGAP1O14490 977 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 SOCS2O14508 198 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 TIPRLO75663 272 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 IL10P22301 178 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 YWHAQP27348 245 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 CPT1AP50416 773 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 MLLT6P55198 1093 aaPredicted RBP12.39□□□□□ -0.43
PDE4A-207ENST00000590407 CDKN2DP55273 166 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 MYBPC3Q14896 1274 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 ATP6AP1Q15904 470 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 TIGD5Q53EQ6 642 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 OGFOD2Q6N063 350 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 MSANTD2Q6P1R3 559 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 TMEM207Q6UWW9 146 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 CYP2R1Q6VVX0 501 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 RAB44Q7Z6P3 723 aaPredicted RBP12.39□□□□□ -0.43
PDE4A-207ENST00000590407 TLK2Q86UE8 772 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 SLC15A3Q8IY34 581 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 PHF21BQ96EK2 531 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 SLC10A4Q96EP9 437 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 MS4A4AQ96JQ5 239 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 MYRFLQ96LU7 910 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 GAD1Q99259 594 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 TRIM54Q9BYV2 358 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 UNKQ9C0B0 810 aaKnown RBP12.39□□□□□ -0.43
PDE4A-207ENST00000590407 NOL6Q9H6R4 1146 aaKnown RBP12.39□□□□□ -0.43
PDE4A-207ENST00000590407 AKTIPQ9H8T0 292 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 POLR3BQ9NW08 1133 aaPredicted RBP12.39□□□□□ -0.43
PDE4A-207ENST00000590407 FIS1Q9Y3D6 152 aa12.39□□□□□ -0.43
PDE4A-207ENST00000590407 TIMM13Q9Y5L4 95 aaPredicted RBP12.39□□□□□ -0.43
PDE4A-207ENST00000590407 KANSL1LA0AUZ9 987 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 TYW5A2RUC4 315 aaKnown RBP12.38□□□□□ -0.43
PDE4A-207ENST00000590407 M0QZQ0 153 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 SUPT7LO94864 414 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 CDK14O94921 469 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 CD1DP15813 335 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 RHOQP17081 205 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 BDNFP23560 247 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 FASP25445 335 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 PSMA4P25789 261 aaKnown RBP12.38□□□□□ -0.43
PDE4A-207ENST00000590407 EPHX2P34913 555 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 GRIA3P42263 894 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 RANBP1P43487 201 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 ESRRGP62508 458 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 FAM110CQ1W6H9 321 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 SLC36A3Q495N2 470 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 PTRH1Q86Y79 214 aaKnown RBP12.38□□□□□ -0.43
PDE4A-207ENST00000590407 RNF135Q8IUD6 432 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 ZNF683Q8IZ20 524 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 FAM47BQ8NA70 645 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 OR9I1Q8NGQ6 314 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 ZNF420Q8TAQ5 688 aaPredicted RBP12.38□□□□□ -0.43
PDE4A-207ENST00000590407 C3orf30Q96M34 536 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 ZNF512Q96ME7 567 aaPredicted RBP12.38□□□□□ -0.43
PDE4A-207ENST00000590407 DOK1Q99704 481 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 TFB2MQ9H5Q4 396 aaKnown RBP12.38□□□□□ -0.43
PDE4A-207ENST00000590407 ALG9Q9H6U8 611 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 SLC52A3Q9NQ40 469 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 NDFIP2Q9NV92 336 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 HS3ST4Q9Y661 456 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 TLL2Q9Y6L7 1015 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 TRIP12Q14669 1992 aaPredicted RBP12.38□□□□□ -0.43
PDE4A-207ENST00000590407 LOC285095A0A1B0GVY8 99 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 ARL5CA6NH57 179 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 TRIM64BA6NI03 449 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 PLOD2O00469 737 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 TNFRSF10BO14763 440 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 AZIN1O14977 448 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 RASAL1O95294 804 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 MMP2P08253 660 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 SLC2A3P11169 496 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 UMPSP11172 480 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 IDO1P14902 403 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 CKMT2P17540 419 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 LBPP18428 481 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 OGNP20774 298 aaKnown RBP12.38□□□□□ -0.43
PDE4A-207ENST00000590407 FGFR3P22607 806 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 KCNC1P48547 511 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 CCT8P50990 548 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 PLK1P53350 603 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 ADARP55265 1226 aaKnown RBP12.38□□□□□ -0.43
PDE4A-207ENST00000590407 RAB15P59190 212 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 SH3BP2P78314 561 aa12.38□□□□□ -0.43
PDE4A-207ENST00000590407 MRPS6P82932 125 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms