RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 USP1O94782 785 aa22.65■■□□□ 1.22
ACTN4-210ENST00000588618 CLDN7O95471 211 aa22.65■■□□□ 1.22
ACTN4-210ENST00000588618 PHBP35232 272 aa22.65■■□□□ 1.22
ACTN4-210ENST00000588618 MTAPQ13126 283 aa22.65■■□□□ 1.22
ACTN4-210ENST00000588618 SKIDA1Q1XH10 827 aa22.65■■□□□ 1.22
ACTN4-210ENST00000588618 STEAP4Q687X5 459 aa22.65■■□□□ 1.22
ACTN4-210ENST00000588618 CWF19L1Q69YN2 538 aaKnown RBP22.65■■□□□ 1.22
ACTN4-210ENST00000588618 CRTC1Q6UUV9 634 aa22.65■■□□□ 1.22
ACTN4-210ENST00000588618 DPPA4Q7L190 304 aa22.65■■□□□ 1.22
ACTN4-210ENST00000588618 TMEM135Q86UB9 458 aa22.65■■□□□ 1.22
ACTN4-210ENST00000588618 UNC5BQ8IZJ1 945 aa22.65■■□□□ 1.22
ACTN4-210ENST00000588618 TTC30BQ8N4P2 665 aa22.65■■□□□ 1.22
ACTN4-210ENST00000588618 ZNF446Q9NWS9 450 aa22.65■■□□□ 1.22
ACTN4-210ENST00000588618 ELFN1P0C7U0 828 aa22.64■■□□□ 1.21
ACTN4-210ENST00000588618 LHCGRP22888 699 aa22.64■■□□□ 1.21
ACTN4-210ENST00000588618 HMGCLP35914 325 aa22.64■■□□□ 1.21
ACTN4-210ENST00000588618 MMP12P39900 470 aa22.64■■□□□ 1.21
ACTN4-210ENST00000588618 CRYMQ14894 314 aa22.64■■□□□ 1.21
ACTN4-210ENST00000588618 SPANXN3Q5MJ09 141 aa22.64■■□□□ 1.21
ACTN4-210ENST00000588618 TSTD2Q5T7W7 516 aa22.64■■□□□ 1.21
ACTN4-210ENST00000588618 PIP5KL1Q5T9C9 394 aa22.64■■□□□ 1.21
ACTN4-210ENST00000588618 C3orf62Q6ZUJ4 267 aa22.64■■□□□ 1.21
ACTN4-210ENST00000588618 USP30Q70CQ3 517 aa22.64■■□□□ 1.21
ACTN4-210ENST00000588618 UHMK1Q8TAS1 419 aaKnown RBP22.64■■□□□ 1.21
ACTN4-210ENST00000588618 STYXQ8WUJ0 223 aa22.64■■□□□ 1.21
ACTN4-210ENST00000588618 PEX13Q92968 403 aa22.64■■□□□ 1.21
ACTN4-210ENST00000588618 SERGEFQ9UGK8 458 aa22.64■■□□□ 1.21
ACTN4-210ENST00000588618 ZNF106Q9H2Y7 1883 aaKnown RBP22.63■■□□□ 1.21
ACTN4-210ENST00000588618 ZCWPW2A0A1B0GU75 182 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 PAPSS2O95340 614 aaPredicted RBP22.63■■□□□ 1.21
ACTN4-210ENST00000588618 APBB3O95704 486 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 C1QAP02745 245 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 AOC1P19801 751 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 CXCL12P48061 93 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 CCR3P51677 355 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 SLC29A2Q14542 456 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 ANKRD20A4Q4UJ75 823 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 AGBL4Q5VU57 503 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 ESRP1Q6NXG1 681 aaKnown RBP22.63■■□□□ 1.21
ACTN4-210ENST00000588618 TRMT10BQ6PF06 316 aaKnown RBP22.63■■□□□ 1.21
ACTN4-210ENST00000588618 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.63■■□□□ 1.212e-9■■■□□ 19.1
ACTN4-210ENST00000588618 CXorf40AQ8TE69 158 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 TREX1Q9NSU2 369 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 IL1RAPL1Q9NZN1 696 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 GGT7Q9UJ14 662 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 FZD4Q9ULV1 537 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 ITM2BQ9Y287 266 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 DOCK9Q9BZ29 2069 aa22.63■■□□□ 1.21
ACTN4-210ENST00000588618 CCL22O00626 93 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 SLC7A4O43246 635 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 GSTA2P09210 222 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 TSHRP16473 764 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 HADHAP40939 763 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 ZNF140P52738 457 aaPredicted RBP22.62■■□□□ 1.21
ACTN4-210ENST00000588618 PRAMEP78395 509 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 SMAD1Q15797 465 aaKnown RBP22.62■■□□□ 1.21
ACTN4-210ENST00000588618 OR4K2Q8NGD2 314 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 OR13C4Q8NGS5 318 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 OR13J1Q8NGT2 312 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 OR14C36Q8NHC7 312 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 GSDMBQ8TAX9 411 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 PPANQ9NQ55 473 aaKnown RBP22.62■■□□□ 1.21
ACTN4-210ENST00000588618 H0Y858 1186 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 AREL1O15033 823 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 TSPAN6O43657 245 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 PIAS1O75925 651 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 PCDH8O95206 1070 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 C7P10643 843 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 TMPRSS15P98073 1019 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 CASP8Q14790 479 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 FAM124AQ86V42 546 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 CAMKK1Q8N5S9 505 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 DNAJC1Q96KC8 554 aaKnown RBP22.62■■□□□ 1.21
ACTN4-210ENST00000588618 WRAP53Q9BUR4 548 aaKnown RBP22.62■■□□□ 1.21
ACTN4-210ENST00000588618 BPIFA1Q9NP55 256 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 SPATA6Q9NWH7 488 aaPredicted RBP22.62■■□□□ 1.21
ACTN4-210ENST00000588618 PKD2L2Q9NZM6 624 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 RIMKLBQ9ULI2 386 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 FADS3Q9Y5Q0 445 aa22.62■■□□□ 1.21
ACTN4-210ENST00000588618 TCRBV9S1A1TA0A576 114 aa22.61■■□□□ 1.21
ACTN4-210ENST00000588618 AP1G1O43747 822 aa22.61■■□□□ 1.21
ACTN4-210ENST00000588618 SHBGP04278 402 aa22.61■■□□□ 1.21
ACTN4-210ENST00000588618 ARNTP27540 789 aa22.61■■□□□ 1.21
ACTN4-210ENST00000588618 TPMTP51580 245 aa22.61■■□□□ 1.21
ACTN4-210ENST00000588618 ARSDP51689 593 aa22.61■■□□□ 1.21
ACTN4-210ENST00000588618 CLCN5P51795 746 aa22.61■■□□□ 1.21
ACTN4-210ENST00000588618 RALGDSQ12967 914 aa22.61■■□□□ 1.21
ACTN4-210ENST00000588618 CNGA3Q16281 694 aa22.61■■□□□ 1.21
ACTN4-210ENST00000588618 FUT8Q9BYC5 575 aa22.61■■□□□ 1.21
ACTN4-210ENST00000588618 CD93Q9NPY3 652 aa22.61■■□□□ 1.21
ACTN4-210ENST00000588618 FNDC3AQ9Y2H6 1198 aaKnown RBP22.61■■□□□ 1.21
ACTN4-210ENST00000588618 FAM169AQ9Y6X4 670 aa22.61■■□□□ 1.21
ACTN4-210ENST00000588618 PI15O43692 258 aa22.6■■□□□ 1.21
ACTN4-210ENST00000588618 STX2P32856 288 aa22.6■■□□□ 1.21
ACTN4-210ENST00000588618 PTSQ03393 145 aa22.6■■□□□ 1.21
ACTN4-210ENST00000588618 SPDYCQ5MJ68 293 aa22.6■■□□□ 1.21
ACTN4-210ENST00000588618 ZDHHC20Q5W0Z9 365 aa22.6■■□□□ 1.21
ACTN4-210ENST00000588618 ZBTB9Q96C00 473 aa22.6■■□□□ 1.21
ACTN4-210ENST00000588618 BTBD1Q9H0C5 482 aa22.6■■□□□ 1.21
ACTN4-210ENST00000588618 SMYD2Q9NRG4 433 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms