RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 CDH17Q12864 832 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 ARHGEF7Q14155 803 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 ACOX1Q15067 660 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 CERCAMQ5T4B2 595 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 HIBCHQ6NVY1 386 aaPredicted RBP10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 C8orf74Q6P047 294 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 LRRC8BQ6P9F7 803 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 ZC3H14Q6PJT7 736 aaKnown RBP10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 SPAG17Q6Q759 2223 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 KDM7AQ6ZMT4 941 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 WDFY4Q6ZS81 3184 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 TMC3Q7Z5M5 1100 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 SDK1Q7Z5N4 2213 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 TECPR1Q7Z6L1 1165 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 CAND1Q86VP6 1230 aaKnown RBP10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 PPIL6Q8IXY8 311 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 TTC30BQ8N4P2 665 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 DNAAF3Q8N9W5 541 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 SNF8Q96H20 258 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 PWWP2AQ96N64 755 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 MYOCQ99972 504 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 PCED1AQ9H1Q7 454 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 KCNH6Q9H252 994 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 EPC1Q9H2F5 836 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 ZFYVE1Q9HBF4 777 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 BPIFA1Q9NP55 256 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 CD84Q9UIB8 345 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 CA5BQ9Y2D0 317 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 ARL5AQ9Y689 179 aa10.71□□□□□ -0.69
SMARCA4-213ENST00000587988 ATXN2Q99700 1313 aaKnown RBP10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 MEI4A8MW99 385 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 BHMG1C9JSJ3 638 aaPredicted RBP10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 PSMD11O00231 422 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 LDB2O43679 373 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 RHOBTB1O94844 696 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 SEC31AO94979 1220 aaKnown RBP10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 SPINT3P49223 89 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 SESN2P58004 480 aaPredicted RBP10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 CRADDP78560 199 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 CDK16Q00536 496 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 CREB5Q02930 508 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 SGCGQ13326 291 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 POU6F1Q14863 301 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 TAF1AQ15573 450 aaPredicted RBP10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 ELF2Q15723 593 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 WSCD2Q2TBF2 565 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 CCDC38Q502W7 563 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 SPDYCQ5MJ68 293 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 LYSMD4Q5XG99 296 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 Q6ZVL8 140 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 MICALCLQ6ZW33 695 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 GLT6D1Q7Z4J2 308 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 PCGF5Q86SE9 256 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 RGL4Q8IZJ4 473 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 PELI3Q8N2H9 469 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 SUMF1Q8NBK3 374 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 TP53I13Q8NBR0 393 aaPredicted RBP10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 MCUQ8NE86 351 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 C1orf216Q8TAB5 229 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 BRSK1Q8TDC3 778 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 DNASE2BQ8WZ79 361 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 FOXJ1Q92949 421 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 CENPTQ96BT3 561 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 SERPINB12Q96P63 405 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 KLF6Q99612 283 aaPredicted RBP10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 GPR63Q9BZJ6 419 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 ABCG8Q9H221 673 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 TRABDQ9H4I3 376 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 MBNL1Q9NR56 388 aaKnown RBP10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 TMEM74BQ9NUR3 256 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 DMGDHQ9UI17 866 aaKnown RBP10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 UTP11Q9Y3A2 253 aaKnown RBP10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 GON4LQ3T8J9 2241 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 SCN8AQ9UQD0 1980 aa10.7□□□□□ -0.7
SMARCA4-213ENST00000587988 ESYT3A0FGR9 886 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 CCDC78A2IDD5 438 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 H0Y8X5 98 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 MGAT1P26572 445 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 CD27P26842 260 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 IGFALSP35858 605 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 HMGCLP35914 325 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 NBL1P41271 181 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 CLDN2P57739 230 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 SARNPP82979 210 aaKnown RBP10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 SEPT6Q14141 434 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 MORF4L2Q15014 288 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 AGERQ15109 404 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 SETMARQ53H47 684 aaPredicted RBP10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 FNBP1LQ5T0N5 605 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 HOOK3Q86VS8 718 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 AGGF1Q8N302 714 aaeCLIP10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 MPP5Q8N3R9 675 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 TMEM145Q8NBT3 493 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 PLA2G15Q8NCC3 412 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 GPR26Q8NDV2 337 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 ASB12Q8WXK4 309 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 PIGKQ92643 395 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 SCAMP4Q969E2 229 aa10.69□□□□□ -0.7
SMARCA4-213ENST00000587988 DTD2Q96FN9 168 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms