RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CDRT15L2A8MXV6 281 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 B4DGG1 531 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 D6RAR5 112 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 MYO1FO00160 1098 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 TNFRSF10CO14798 259 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 ATXN7O15265 892 aaPredicted RBP14.35□□□□□ -0.11
VMP1-206ENST00000587945 MFSD11O43934 449 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 NOBOXO60393 691 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 PGLSO95336 258 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 MAP3K6O95382 1288 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 FUCA1P04066 466 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 KELP23276 732 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 SERPINB6P35237 376 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 ARHGAP40Q5TG30 622 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 BROXQ5VW32 411 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 OGFOD3Q6PK18 319 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 RFLNAQ6ZTI6 216 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 HEATR4Q86WZ0 1026 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 CBARPQ8N350 705 aaPredicted RBP14.35□□□□□ -0.11
VMP1-206ENST00000587945 BBS5Q8N3I7 341 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.35□□□□□ -0.11
VMP1-206ENST00000587945 LRRN4Q8WUT4 740 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 PTCD2Q8WV60 388 aaKnown RBP14.35□□□□□ -0.11
VMP1-206ENST00000587945 SPOCK2Q92563 424 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 DTD2Q96FN9 168 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 LRRN3Q9H3W5 708 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 DPEP2Q9H4A9 486 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 CARS2Q9HA77 564 aaKnown RBP14.35□□□□□ -0.11
VMP1-206ENST00000587945 EPB41L5Q9HCM4 733 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 IFNKQ9P0W0 207 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 ATXN7L1Q9ULK2 861 aaPredicted RBP14.35□□□□□ -0.11
VMP1-206ENST00000587945 PHTF1Q9UMS5 762 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 LUC7L2Q9Y383 392 aaKnown RBP14.35□□□□□ -0.11
VMP1-206ENST00000587945 RNF215Q9Y6U7 377 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 BPTFQ12830 3046 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 TEX51A0A1B0GUA7 166 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 A0A1W2PQ67 120 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 PRSS38A1L453 326 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 GOLGA6CA6NDK9 693 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 GOLGA6BA6NDN3 693 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 C1QL1O75973 258 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 GYPCP04921 128 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 PDHA1P08559 390 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 GOLGA6DP0CG33 693 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 CYP2A6P11509 494 aaPredicted RBP14.34□□□□□ -0.11
VMP1-206ENST00000587945 MYCLP1P12525 358 aaPredicted RBP14.34□□□□□ -0.11
VMP1-206ENST00000587945 HGFP14210 728 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 ARSEP51690 589 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 INHBCP55103 352 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 TMPRSS3P57727 454 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 SKOR1P84550 965 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 ITKQ08881 620 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 DPYSL3Q14195 570 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 CERCAMQ5T4B2 595 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 ARMC12Q5T9G4 340 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 SPECC1LQ69YQ0 1117 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 PCSK4Q6UW60 755 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 Q6ZVL8 140 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 CCNJLQ8IV13 435 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 FBXO39Q8N4B4 442 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 ARL14Q8N4G2 192 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 TEX26Q8N6G2 289 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 OR6C4Q8NGE1 309 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 ZNF564Q8TBZ8 553 aaPredicted RBP14.34□□□□□ -0.11
VMP1-206ENST00000587945 PIH1D2Q8WWB5 315 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 SEMA3CQ99985 751 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 DPH1Q9BZG8 443 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 PHPT1Q9NRX4 125 aaPredicted RBP14.34□□□□□ -0.11
VMP1-206ENST00000587945 SPATS2LQ9NUQ6 558 aaKnown RBP14.34□□□□□ -0.11
VMP1-206ENST00000587945 GOLGA6AQ9NYA3 693 aa14.34□□□□□ -0.11
VMP1-206ENST00000587945 GOLGA6L19H0YKK7 550 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 PDE2AO00408 941 aaPredicted RBP14.33□□□□□ -0.12
VMP1-206ENST00000587945 PLD2O14939 933 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 CEACAM5P06731 702 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 GLB1P16278 677 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 CASP14P31944 242 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 GNPDA1P46926 289 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 POLD2P49005 469 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 MAZP56270 477 aaKnown RBP14.33□□□□□ -0.12
VMP1-206ENST00000587945 TAS2R40P59535 323 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 CDK3Q00526 305 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 HLTFQ14527 1009 aaKnown RBP eCLIP14.33□□□□□ -0.12
VMP1-206ENST00000587945 IHHQ14623 411 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 HADHQ16836 314 aaKnown RBP14.33□□□□□ -0.12
VMP1-206ENST00000587945 C14orf28Q4W4Y0 310 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 NCBP2-AS2Q69YL0 99 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 RAET1GQ6H3X3 334 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 RAB11FIP2Q7L804 512 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 NRROSQ86YC3 692 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 FAM71BQ8TC56 605 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 SCRN2Q96FV2 425 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 LIN37Q96GY3 246 aaPredicted RBP14.33□□□□□ -0.12
VMP1-206ENST00000587945 MCCC1Q96RQ3 725 aaPredicted RBP14.33□□□□□ -0.12
VMP1-206ENST00000587945 PACSIN1Q9BY11 444 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 TEX101Q9BY14 249 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 FRMD8Q9BZ67 464 aaPredicted RBP14.33□□□□□ -0.12
VMP1-206ENST00000587945 WDR70Q9NW82 654 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 RCOR3Q9P2K3 495 aaPredicted RBP14.33□□□□□ -0.12
VMP1-206ENST00000587945 LRIT1Q9P2V4 623 aa14.33□□□□□ -0.12
VMP1-206ENST00000587945 CD84Q9UIB8 345 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms