RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 NSUN2Q08J23 767 aaKnown RBP eCLIP15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 KLHL30Q0D2K2 578 aa15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 HLTFQ14527 1009 aaKnown RBP eCLIP15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 RFTN1Q14699 578 aaPredicted RBP15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 C14orf28Q4W4Y0 310 aa15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 CCDC81Q6ZN84 652 aa15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 RFLNAQ6ZTI6 216 aa15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 HSD11B1LQ7Z5J1 315 aa15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 NRROSQ86YC3 692 aa15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 FNIP1Q8TF40 1166 aa15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 EIF3CQ99613 913 aaKnown RBP15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 CARS2Q9HA77 564 aaKnown RBP15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 SPATS2LQ9NUQ6 558 aaKnown RBP15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 GOLGA6AQ9NYA3 693 aa15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 AIPL1Q9NZN9 384 aa15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 LRIT1Q9P2V4 623 aa15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 ST14Q9Y5Y6 855 aa15.21■□□□□ 0.03
PRKCSH-204ENST00000587290 PRAMEF33A0A0G2JMD5 474 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 CFAP69A5D8W1 941 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 NPIPB15A6NHN6 443 aaPredicted RBP15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 H3BRJ5 948 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 MAFKO60675 156 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 PRAMEF10O60809 474 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 HEXIM1O94992 359 aaKnown RBP15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 JMJD7P0C870 316 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 GLB1P16278 677 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 CTPS1P17812 591 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 CR2P20023 1033 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 CCKBRP32239 447 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 PRKCIP41743 596 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 GNPDA1P46926 289 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 POLD2P49005 469 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 POLR2LP62875 67 aaKnown RBP15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 DPYSL2Q16555 572 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 AMZ1Q400G9 498 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 PHF19Q5T6S3 580 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 OGFOD3Q6PK18 319 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 DOK6Q6PKX4 331 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 POLNQ7Z5Q5 900 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 VASH2Q86V25 355 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 CPNE8Q86YQ8 564 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 SNRNP27Q8WVK2 155 aaKnown RBP15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 CCDC97Q96F63 343 aaPredicted RBP15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 CSPG4P5Q96PW8 444 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 STRADBQ9C0K7 418 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 SEMA6CQ9H3T2 930 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 FOXJ2Q9P0K8 574 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 CD84Q9UIB8 345 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 APPL1Q9UKG1 709 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 SCINQ9Y6U3 715 aa15.2■□□□□ 0.02
PRKCSH-204ENST00000587290 HTRA2O43464 458 aaPredicted RBP15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 MAP3K6O95382 1288 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 CEACAM5P06731 702 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 RARAP10276 462 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 MYCLP1P12525 358 aaPredicted RBP15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 GZMAP12544 262 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 KELP23276 732 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 VIPR1P32241 457 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 HCAR3P49019 387 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 MAPK10P53779 464 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 OR1D5P58170 312 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 MMRN1Q13201 1228 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 ARHGEF7Q14155 803 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 C16orf72Q14CZ0 275 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 MAP9Q49MG5 647 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 PPP1R2P3Q6NXS1 205 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 SLC30A9Q6PML9 568 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 TMCO3Q6UWJ1 677 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 Q6ZVL8 140 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 TRIM74Q86UV6 250 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 ZFAND4Q86XD8 727 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 PSTKQ8IV42 348 aaKnown RBP15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 ATPAF2Q8N5M1 289 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 LRRN4Q8WUT4 740 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 DTD2Q96FN9 168 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 TMEM74Q96NL1 305 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 NUDCD1Q96RS6 583 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 CCNL2Q96S94 520 aaPredicted RBP15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 MGME1Q9BQP7 344 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 NUDT22Q9BRQ3 303 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 PCDH18Q9HCL0 1135 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 PLEKHM1Q9Y4G2 1056 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 BSNQ9UPA5 3926 aa15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 ASH1LQ9NR48 2969 aaKnown RBP15.19■□□□□ 0.02
PRKCSH-204ENST00000587290 A0A1B0GTH6 734 aa15.18■□□□□ 0.02
PRKCSH-204ENST00000587290 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.18■□□□□ 0.02
PRKCSH-204ENST00000587290 GOLGA6L22H0YM25 854 aa15.18■□□□□ 0.02
PRKCSH-204ENST00000587290 TNFRSF10CO14798 259 aa15.18■□□□□ 0.02
PRKCSH-204ENST00000587290 B4GAT1O43505 415 aa15.18■□□□□ 0.02
PRKCSH-204ENST00000587290 SOCS5O75159 536 aa15.18■□□□□ 0.02
PRKCSH-204ENST00000587290 MBD3O95983 291 aa15.18■□□□□ 0.02
PRKCSH-204ENST00000587290 PDHA1P08559 390 aa15.18■□□□□ 0.02
PRKCSH-204ENST00000587290 CD48P09326 243 aa15.18■□□□□ 0.02
PRKCSH-204ENST00000587290 CCNB1P14635 433 aa15.18■□□□□ 0.02
PRKCSH-204ENST00000587290 PCK1P35558 622 aa15.18■□□□□ 0.02
PRKCSH-204ENST00000587290 ARL4AP40617 200 aa15.18■□□□□ 0.02
PRKCSH-204ENST00000587290 MLLT3P42568 568 aaPredicted RBP15.18■□□□□ 0.02
PRKCSH-204ENST00000587290 RENBPP51606 427 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms