RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 C10orf142B7Z368 130 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 TRAFD1O14545 582 aaPredicted RBP12.68□□□□□ -0.38
VMP1-202ENST00000585847 MID1O15344 667 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 LAMTOR5O43504 91 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 PMPCBO75439 489 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 FAM155BO75949 473 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 KRT37O76014 449 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 KRT38O76015 456 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 PIGNO95427 931 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 APBB3O95704 486 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 POP4O95707 220 aaKnown RBP12.68□□□□□ -0.38
VMP1-202ENST00000585847 CRTAMO95727 393 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 INHBAP08476 426 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 SERPINA4P29622 427 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 HADHAP40939 763 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 RECQLP46063 649 aaPredicted RBP12.68□□□□□ -0.38
VMP1-202ENST00000585847 PSMD8P48556 350 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 SCNN1BP51168 640 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 MGAT5Q09328 741 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 TRAF2Q12933 501 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 FASTKD3Q14CZ7 662 aaKnown RBP12.68□□□□□ -0.38
VMP1-202ENST00000585847 SLC1A5Q15758 541 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 CST6Q15828 149 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 MSS51Q4VC12 460 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 ZNF776Q68DI1 518 aaPredicted RBP12.68□□□□□ -0.38
VMP1-202ENST00000585847 PDPK2PQ6A1A2 396 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 KIAA0930Q6ICG6 404 aaPredicted RBP12.68□□□□□ -0.38
VMP1-202ENST00000585847 UNC5AQ6ZN44 842 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 KIAA0408Q6ZU52 694 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 GALNT7Q86SF2 657 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 SLC26A11Q86WA9 606 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 CACUL1Q86Y37 369 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 RAVER1Q8IY67 606 aaKnown RBP12.68□□□□□ -0.38
VMP1-202ENST00000585847 TAB3Q8N5C8 712 aaPredicted RBP12.68□□□□□ -0.38
VMP1-202ENST00000585847 AADATQ8N5Z0 425 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 FRMD1Q8N878 549 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 TMIEQ8NEW7 156 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 OR52K1Q8NGK4 314 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 HMGB4Q8WW32 186 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 FAM167BQ9BTA0 163 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 OSBPL1AQ9BXW6 950 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 CPEB1Q9BZB8 566 aaKnown RBP12.68□□□□□ -0.38
VMP1-202ENST00000585847 TPSD1Q9BZJ3 242 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 ZDHHC6Q9H6R6 413 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 SSU72Q9NP77 194 aaKnown RBP12.68□□□□□ -0.38
VMP1-202ENST00000585847 MOCS1Q9NZB8 636 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 USP36Q9P275 1121 aaKnown RBP12.68□□□□□ -0.38
VMP1-202ENST00000585847 TXNDC16Q9P2K2 825 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 NCDNQ9UBB6 729 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 IL36AQ9UHA7 158 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 TCAF1Q9Y4C2 921 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.68□□□□□ -0.38
VMP1-202ENST00000585847 RPS6KL1Q9Y6S9 549 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 FAM169AQ9Y6X4 670 aa12.68□□□□□ -0.38
VMP1-202ENST00000585847 LRRK1Q38SD2 2015 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 ABCA7Q8IZY2 2146 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 CEP192Q8TEP8 1941 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 TSPAN11A1L157 253 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 FAM159BA6NKW6 160 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 SPINT1O43278 529 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 HTRA2O43464 458 aaPredicted RBP12.67□□□□□ -0.38
VMP1-202ENST00000585847 SYF2O95926 243 aaKnown RBP12.67□□□□□ -0.38
VMP1-202ENST00000585847 MT-CYBP00156 380 aaPredicted RBP12.67□□□□□ -0.38
VMP1-202ENST00000585847 PRLP01236 227 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 MGAT1P26572 445 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 SLC8A1P32418 973 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 MSH2P43246 934 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 POLD2P49005 469 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 FNTBP49356 437 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 SUOXP51687 545 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 SESN2P58004 480 aaPredicted RBP12.67□□□□□ -0.38
VMP1-202ENST00000585847 GPX6P59796 221 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 CSTF1Q05048 431 aaKnown RBP12.67□□□□□ -0.38
VMP1-202ENST00000585847 LONRF1Q17RB8 773 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 MAP7D1Q3KQU3 841 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 POM121L1PQ3SYA9 428 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 TNFAIP8L3Q5GJ75 292 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 DENND5AQ6IQ26 1287 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 MARK2Q7KZI7 788 aaKnown RBP12.67□□□□□ -0.38
VMP1-202ENST00000585847 CAMK1DQ8IU85 385 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 ANKMY2Q8IV38 441 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 SPATA22Q8NHS9 363 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 FAM76AQ8TAV0 307 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 GRIN3AQ8TCU5 1115 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 SLC44A1Q8WWI5 657 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 ECHDC3Q96DC8 303 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 SIPA1Q96FS4 1042 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 CERS2Q96G23 380 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 TRIB3Q96RU7 358 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 WDR83Q9BRX9 315 aaKnown RBP12.67□□□□□ -0.38
VMP1-202ENST00000585847 ITM2CQ9NQX7 267 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 SYBUQ9NX95 663 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 RABGEF1Q9UJ41 708 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 FBXO4Q9UKT5 387 aa12.67□□□□□ -0.38
VMP1-202ENST00000585847 CCDC163A0A0D9SF12 145 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 F5H423 210 aaPredicted RBP12.66□□□□□ -0.38
VMP1-202ENST00000585847 PFDN6O15212 129 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 SLC7A4O43246 635 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 FZD6O60353 706 aa12.66□□□□□ -0.38
VMP1-202ENST00000585847 IL1BP01584 269 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms