RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 TMEM151AQ8N4L1 468 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 ZNF557Q8N988 423 aaPredicted RBP11.28□□□□□ -0.6
LIG3-204ENST00000585740 KREMEN2Q8NCW0 462 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 LPCAT1Q8NF37 534 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 ADAMTS19Q8TE59 1207 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 OLFM1Q99784 485 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 AARSD1Q9BTE6 412 aaKnown RBP11.28□□□□□ -0.6
LIG3-204ENST00000585740 ZBED2Q9BTP6 218 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 CCDC106Q9BWC9 280 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 LRRC3Q9BY71 257 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 CCDC68Q9H2F9 335 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 SYTL2Q9HCH5 934 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 MRGBPQ9NV56 204 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 DNMT3BQ9UBC3 853 aaKnown RBP11.28□□□□□ -0.6
LIG3-204ENST00000585740 LHX3Q9UBR4 397 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 BAIAP2L1Q9UHR4 511 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 VPS51Q9UID3 782 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 TRIM33Q9UPN9 1127 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 OR51B4Q9Y5P0 310 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 ARL5AQ9Y689 179 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 COMMD10Q9Y6G5 202 aa11.28□□□□□ -0.6
LIG3-204ENST00000585740 GOLGA8QA0A0J9YX86 632 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 GOLGA8OA6NCC3 632 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 C2orf71A6NGG8 1288 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 ANKRD66B4E2M5 251 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 GOLGA8NF8WBI6 632 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 H7C0S8 307 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 ZNF195O14628 629 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 HDAC3O15379 428 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 STX7O15400 261 aaKnown RBP11.27□□□□□ -0.61
LIG3-204ENST00000585740 SNAP91O60641 907 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 GJB3O75712 270 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 CD160O95971 181 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 PRLP01236 227 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 LMNAP02545 664 aaKnown RBP11.27□□□□□ -0.61
LIG3-204ENST00000585740 SBK3P0C264 359 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 CCDC166P0CW27 439 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 CD9P21926 228 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 MZF1P28698 734 aaPredicted RBP11.27□□□□□ -0.61
LIG3-204ENST00000585740 GMPRP36959 345 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 PLA2G5P39877 138 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 GLRBP48167 497 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 PLK1P53350 603 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 ALDH18A1P54886 795 aaKnown RBP11.27□□□□□ -0.61
LIG3-204ENST00000585740 NAA20P61599 178 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 CYP4F8P98187 520 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 GALNT1Q10472 559 aaPredicted RBP11.27□□□□□ -0.61
LIG3-204ENST00000585740 DLG1Q12959 904 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 TUBB3Q13509 450 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 ZNF460Q14592 562 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 ZNF789Q5FWF6 425 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 PPM1LQ5SGD2 360 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 ARMC12Q5T9G4 340 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 SEL1L3Q68CR1 1132 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 PSRC1Q6PGN9 363 aaPredicted RBP11.27□□□□□ -0.61
LIG3-204ENST00000585740 NAPRTQ6XQN6 538 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 ACAD11Q709F0 780 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 GAREM2Q75VX8 874 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 TMPRSS6Q8IU80 811 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 ZNF781Q8N8C0 355 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 MAB21L3Q8N8X9 362 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 KLHL23Q8NBE8 558 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 LEMD2Q8NC56 503 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 OR4K2Q8NGD2 314 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 OR13C4Q8NGS5 318 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 CFAP61Q8NHU2 1237 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 FIBINQ8TAL6 211 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 PHOSPHO2Q8TCD6 241 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.61
LIG3-204ENST00000585740 DDI1Q8WTU0 396 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.27□□□□□ -0.61
LIG3-204ENST00000585740 MCUR1Q96AQ8 359 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 ALG14Q96F25 216 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 UBXN10Q96LJ8 280 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 SLC22A12Q96S37 553 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 CYP2S1Q96SQ9 504 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 NDNQ99608 321 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 RAD9AQ99638 391 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 EBF4Q9BQW3 602 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 TRMOQ9BU70 441 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 CCDC28BQ9BUN5 200 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 C1orf21Q9H246 121 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 EML4Q9HC35 981 aaKnown RBP11.27□□□□□ -0.61
LIG3-204ENST00000585740 CFAP97Q9P2B7 532 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 MARCH4Q9P2E8 410 aaPredicted RBP11.27□□□□□ -0.61
LIG3-204ENST00000585740 ZMYM5Q9UJ78 669 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 ARHGAP26Q9UNA1 814 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 KCTD3Q9Y597 815 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 ACTL7AQ9Y615 435 aa11.27□□□□□ -0.61
LIG3-204ENST00000585740 TMEM265A0A087WTH1 108 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 OR51F1A6NGY5 319 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 TRPC5OSA6NMA1 111 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 GOLGA8CPA6NN73 597 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 MATN2O00339 956 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 AURKAO14965 403 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 SLC22A2O15244 555 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 FZD6O60353 706 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 DIAPH2O60879 1101 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 SOCS5O75159 536 aa11.26□□□□□ -0.61
LIG3-204ENST00000585740 SMIM24O75264 130 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms