RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 UCMAQ8WVF2 138 aa14□□□□□ -0.17
UBBP4-202ENST00000584755 SUDS3Q9H7L9 328 aaPredicted RBP14□□□□□ -0.17
UBBP4-202ENST00000584755 KCNK9Q9NPC2 374 aa14□□□□□ -0.17
UBBP4-202ENST00000584755 POLR3BQ9NW08 1133 aaPredicted RBP14□□□□□ -0.17
UBBP4-202ENST00000584755 THAP10Q9P2Z0 257 aaPredicted RBP14□□□□□ -0.17
UBBP4-202ENST00000584755 IL36AQ9UHA7 158 aa14□□□□□ -0.17
UBBP4-202ENST00000584755 MTO1Q9Y2Z2 717 aaKnown RBP14□□□□□ -0.17
UBBP4-202ENST00000584755 SCN8AQ9UQD0 1980 aa14□□□□□ -0.17
UBBP4-202ENST00000584755 OR51F1A6NGY5 319 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 TM9SF1O15321 606 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 STX7O15400 261 aaKnown RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 LEFTY1O75610 366 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 ZWINTO95229 277 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 APODP05090 189 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 KCNA5P22460 613 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 RPA3P35244 121 aaPredicted RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 CD151P48509 253 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 SERPINB8P50452 374 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 POLR2LP62875 67 aaKnown RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 TMPRSS15P98073 1019 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 TYSND1Q2T9J0 566 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 FNDC3BQ53EP0 1204 aaKnown RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 C9orf64Q5T6V5 341 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 MRNIPQ6NTE8 343 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 TPRG1Q6ZUI0 275 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 MICALCLQ6ZW33 695 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 USP45Q70EL2 814 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 PTAR1Q7Z6K3 402 aaPredicted RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 KLHL32Q96NJ5 620 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 KLF6Q99612 283 aaPredicted RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 GPR63Q9BZJ6 419 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 MTG2Q9H4K7 406 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 CCDC134Q9H6E4 229 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 ZFYVE1Q9HBF4 777 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 INTS9Q9NV88 658 aaKnown RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 MARCH4Q9P2E8 410 aaPredicted RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 TICRRQ7Z2Z1 1910 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 BPTFQ12830 3046 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 ZNF106Q9H2Y7 1883 aaKnown RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 NPIPB15A6NHN6 443 aaPredicted RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 GOLGA8RI6L899 631 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 TPP1O14773 563 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 CD3EAPO15446 510 aaKnown RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 ASMTLO95671 621 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 S1PR4O95977 384 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 F7P08709 466 aaPredicted RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 CHRM1P11229 460 aaPredicted RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 HNRNPLP14866 589 aaKnown RBP eCLIP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 FOXN2P32314 431 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 CRHR1P34998 444 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 XIAPP98170 497 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 PEX6Q13608 980 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 E2F5Q15329 346 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 TERF2Q15554 542 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 AAK1Q2M2I8 961 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 ZNF805Q5CZA5 627 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 ARSIQ5FYB1 569 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 GPR153Q6NV75 609 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 CRTC1Q6UUV9 634 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 NUDT18Q6ZVK8 323 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 CBARPQ8N350 705 aaPredicted RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 TMIEQ8NEW7 156 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 GRIN3AQ8TCU5 1115 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 CSGALNACT1Q8TDX6 532 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 FBRSL1Q9HCM7 1045 aaKnown RBP13.99□□□□□ -0.17
UBBP4-202ENST00000584755 SNX15Q9NRS6 342 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 CATSPERZQ9NTU4 200 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 NKIRAS1Q9NYS0 192 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 PKP3Q9Y446 797 aa13.99□□□□□ -0.17
UBBP4-202ENST00000584755 C1orf232A0A0U1RR37 186 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 COPEO14579 308 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 NPC1O15118 1278 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 HAUS5O94927 633 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 PRNPP04156 253 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 TIMP2P16035 220 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 SP100P23497 879 aaPredicted RBP13.98□□□□□ -0.17
UBBP4-202ENST00000584755 LSP1P33241 339 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 IL12RB1P42701 662 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 TNFRSF4P43489 277 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 GALK1P51570 392 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 CLCN5P51795 746 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 STC1P52823 247 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 PTPN5P54829 565 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 WDR4P57081 412 aaKnown RBP13.98□□□□□ -0.17
UBBP4-202ENST00000584755 GNGT1P63211 74 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 PDE1CQ14123 709 aaPredicted RBP13.98□□□□□ -0.17
UBBP4-202ENST00000584755 SEMA3AQ14563 771 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 ELAVL3Q14576 367 aaKnown RBP13.98□□□□□ -0.17
UBBP4-202ENST00000584755 PLCD3Q8N3E9 789 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 ZNF366Q8N895 744 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 ACVR1CQ8NER5 493 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 TCP10LQ8TDR4 215 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 DNASE1L2Q92874 299 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 CABS1Q96KC9 395 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 FAM129BQ96TA1 746 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 TCF12Q99081 682 aa13.98□□□□□ -0.17
UBBP4-202ENST00000584755 PHF7Q9BWX1 381 aaPredicted RBP13.98□□□□□ -0.17
UBBP4-202ENST00000584755 FBXO6Q9NRD1 293 aaPredicted RBP13.98□□□□□ -0.17
UBBP4-202ENST00000584755 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.98□□□□□ -0.17
UBBP4-202ENST00000584755 FKBPLQ9UIM3 349 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms