RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 ITKQ08881 620 aa17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 BMPR2Q13873 1038 aa17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 FSCBQ5H9T9 825 aa17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 C6orf89Q6UWU4 347 aa17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 PRR23CQ6ZRP0 262 aa17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 SPATS2Q86XZ4 545 aaKnown RBP17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 NETO1Q8TDF5 533 aa17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 PEX13Q92968 403 aa17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 LMLNQ96KR4 655 aa17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 NSMCE3Q96MG7 304 aa17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 FEM1AQ9BSK4 669 aa17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 MLXIPLQ9NP71 852 aa17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 POLR3BQ9NW08 1133 aaPredicted RBP17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 SLC17A6Q9P2U8 582 aa17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 CDV3Q9UKY7 258 aaKnown RBP17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 PLLPQ9Y342 182 aa17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 MYLKQ15746 1914 aa17.9■□□□□ 0.46
EIF4A1-216ENST00000580888 MED19A0JLT2 244 aaPredicted RBP17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 TCP11X1B4DZS4 312 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 GOLGA8RI6L899 631 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 ADH1CP00326 375 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 ALDOAP04075 364 aaKnown RBP17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 FGF1P05230 155 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 PLK1P53350 603 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 MRPS21P82921 87 aaKnown RBP17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 CDK18Q07002 472 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 NSUN2Q08J23 767 aaKnown RBP eCLIP17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 POU6F1Q14863 301 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 MPPE1Q53F39 396 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 HSP90AA5PQ58FG0 334 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 RALGPS1Q5JS13 557 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 SIRPB2Q5JXA9 342 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 TSTD2Q5T7W7 516 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 MROH9Q5TGP6 573 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 HHATQ5VTY9 493 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 ESRP1Q6NXG1 681 aaKnown RBP17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 CDHR3Q6ZTQ4 885 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 NLRP9Q7RTR0 991 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 CPLX4Q7Z7G2 160 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 GDAP1Q8TB36 358 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 SEC16BQ96JE7 1060 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 HHIPQ96QV1 700 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 NUDCD1Q96RS6 583 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 SRPK1Q96SB4 655 aaKnown RBP17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 AGAP2Q99490 1192 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 SPON2Q9BUD6 331 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 NSRP1Q9H0G5 558 aaKnown RBP17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 C20orf96Q9NUD7 363 aaPredicted RBP17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 SLC17A7Q9P2U7 560 aa17.89■□□□□ 0.45
EIF4A1-216ENST00000580888 TPRP12270 2363 aaKnown RBP17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 TYW5A2RUC4 315 aaKnown RBP17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 EBAG9O00559 213 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 COPEO14579 308 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 SERPINF2P08697 491 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 ADH5P11766 374 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 MZF1P28698 734 aaPredicted RBP17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 HADHAP40939 763 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 RGRP47804 291 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 POLD2P49005 469 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 PCSK7Q16549 785 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 INSCQ1MX18 579 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 HSF5Q4G112 596 aaPredicted RBP17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 STRA8Q7Z7C7 330 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 GALNT7Q86SF2 657 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 KBTBD6Q86V97 674 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 BBS7Q8IWZ6 715 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.88■□□□□ 0.455e-38■■□□□ 12.7
EIF4A1-216ENST00000580888 DCAF4L2Q8NA75 395 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 FIBINQ8TAL6 211 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 CINPQ9BW66 212 aaPredicted RBP17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 IL1RAPL1Q9NZN1 696 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 MMP17Q9ULZ9 603 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 SH3BP1Q9Y3L3 701 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 PCDHGA5Q9Y5G8 931 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 ACTL7AQ9Y615 435 aa17.88■□□□□ 0.45
EIF4A1-216ENST00000580888 TNRC6BQ9UPQ9 1833 aaKnown RBP17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 TTC24A2A3L6 582 aaPredicted RBP17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 SLC30A4O14863 429 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 INSIG1O15503 277 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 HOXC11O43248 304 aaPredicted RBP17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 TIMM44O43615 452 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 LDB2O43679 373 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 NDST3O95803 873 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 IL1BP01584 269 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 VIMP08670 466 aaKnown RBP17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 SLC6A11P48066 632 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 LAMB3Q13751 1172 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 DBN1Q16643 649 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 PLK5Q496M5 336 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 PLA2G2CQ5R387 149 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 GKAP1Q5VSY0 366 aaPredicted RBP17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 ETFBKMTQ8IXQ9 262 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 PHTF2Q8N3S3 785 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 CARNMT1Q8N4J0 409 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 SLC25A41Q8N5S1 370 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 WFDC5Q8TCV5 224 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 GRAMD1AQ96CP6 724 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 MUC3BQ9H195 1237 aa17.87■□□□□ 0.45
EIF4A1-216ENST00000580888 NOD2Q9HC29 1040 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms