RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 ANGPT1Q15389 498 aa15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 ZNF528Q3MIS6 628 aa15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 CCDC38Q502W7 563 aa15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 DNAJC21Q5F1R6 531 aaKnown RBP15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 PCID2Q5JVF3 399 aa15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 ARMC3Q5W041 872 aa15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 TBC1D3GQ6DHY5 549 aa15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 TBC1D3CQ6IPX1 549 aa15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 KIAA1161Q6NSJ0 714 aa15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 TBC1D3Q8IZP1 549 aaPredicted RBP15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 EIF1ADQ8N9N8 165 aaKnown RBP15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 PPHLN1Q8NEY8 458 aaKnown RBP15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 PHACTR1Q9C0D0 580 aa15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 MTRF1LQ9UGC7 380 aaKnown RBP15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 MBD1Q9UIS9 605 aaPredicted RBP15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 NFU1Q9UMS0 254 aa15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 ZFR2Q9UPR6 939 aaKnown RBP15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 INVSQ9Y283 1065 aa15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 TCAF1Q9Y4C2 921 aa15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 ARL5AQ9Y689 179 aa15.91■□□□□ 0.14
CSNK1D-212ENST00000580061 A0A1W2PQU0 124 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 PRR23AA6NEV1 266 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 MROH6A6NGR9 719 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 C2orf81A6NN90 581 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 GALR2O43603 387 aaPredicted RBP15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 BANF1O75531 89 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 SLC4A1P02730 911 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 SP9P0CG40 484 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 C6P13671 934 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 GM2AP17900 193 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 LPOP22079 712 aaPredicted RBP15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 RPS21P63220 83 aaKnown RBP15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 PDE1BQ01064 536 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 CREB5Q02930 508 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 LAMB3Q13751 1172 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 SEPT6Q14141 434 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 NAA30Q147X3 362 aaPredicted RBP15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 BBS9Q3SYG4 887 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 TMEM259Q4ZIN3 620 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 SEL1L3Q68CR1 1132 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 SLC36A4Q6YBV0 504 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 CENPUQ71F23 418 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 HSD11B1LQ7Z5J1 315 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 HORMAD1Q86X24 394 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 RAVER1Q8IY67 606 aaKnown RBP15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 GPR161Q8N6U8 529 aaKnown RBP15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 PTCD2Q8WV60 388 aaKnown RBP15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 COQ10AQ96MF6 247 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 FMO2Q99518 471 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 GPR174Q9BXC1 333 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 MRM3Q9HC36 420 aaKnown RBP15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 IL17CQ9P0M4 197 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 SOX13Q9UN79 622 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 KCTD3Q9Y597 815 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 TEX264Q9Y6I9 313 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 BPTFQ12830 3046 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 FANCMQ8IYD8 2048 aa15.9■□□□□ 0.14
CSNK1D-212ENST00000580061 THADAQ6YHU6 1953 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 MAGEB16A2A368 324 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 IGLON5A6NGN9 336 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 EIF3HO15372 352 aaKnown RBP eCLIP15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 BUD23O43709 281 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 TM7SF2O76062 418 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 ZNF140P52738 457 aaPredicted RBP15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 PPP2CBP62714 309 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 PPP2CAP67775 309 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 PDIA2Q13087 525 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 PTPRCAPQ14761 206 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 ACOX1Q15067 660 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 WDR93Q6P2C0 686 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 CASC4Q6P4E1 433 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 TECPR1Q7Z6L1 1165 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 TRIM69Q86WT6 500 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 STYXQ8WUJ0 223 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 LRRC39Q96DD0 335 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 C19orf43Q9BQ61 176 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 WDR83Q9BRX9 315 aaKnown RBP15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 LRFN3Q9BTN0 628 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 KIFC1Q9BW19 673 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 C6orf106Q9H6K1 298 aaPredicted RBP15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 CHRAC1Q9NRG0 131 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 COQ6Q9Y2Z9 468 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 ABCA7Q8IZY2 2146 aa15.89■□□□□ 0.13
CSNK1D-212ENST00000580061 RGSL1A5PLK6 1076 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 STX7O15400 261 aaKnown RBP15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 LZTS3O60299 673 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 NDUFS2O75306 463 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 RECQL5O94762 991 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 MYBL2P10244 700 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 BCKDHBP21953 392 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 PSMA3P25788 255 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 ETV3P41162 512 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 ELK3P41970 407 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 SPINT3P49223 89 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 CCR5P51681 352 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 VSNL1P62760 191 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 FGL2Q14314 439 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 FASTKD3Q14CZ7 662 aaKnown RBP15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 AGERQ15109 404 aa15.88■□□□□ 0.13
CSNK1D-212ENST00000580061 ZNF284Q2VY69 593 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms