RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 AREL1O15033 823 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 MCF2LO15068 1137 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ZNF185O15231 689 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 MATN3O15232 486 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 TP73O15350 636 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ZSCAN12O43309 604 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 HTRA2O43464 458 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 PRLP01236 227 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ATP5BP06576 529 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 EPHX1P07099 455 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 TNNT1P13805 278 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 PRLRP16471 622 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 PCSK2P16519 638 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 BCKDHBP21953 392 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 CCNCP24863 283 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 PTPN3P26045 913 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 GKP32189 559 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 CXCR5P32302 372 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 SERPINB6P35237 376 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ETFBP38117 255 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 P2RY2P41231 377 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 CXCL12P48061 93 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 PXNP49023 591 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 CCR3P51677 355 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 CCNHP51946 323 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 DGKEP52429 567 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ETF1P62495 437 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 DYNLT1P63172 113 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 OTUD4Q01804 1114 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 SLC20A2Q08357 652 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 NSUN2Q08J23 767 aaKnown RBP eCLIP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 TRAF2Q12933 501 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 RALGDSQ12967 914 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 SRSF5Q13243 272 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 MSLNQ13421 630 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 XRCC4Q13426 336 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 HNRNPDQ14103 355 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 TFDP2Q14188 446 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ELAVL3Q14576 367 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 RFTN1Q14699 578 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ANGPT1Q15389 498 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 KCTD19Q17RG1 926 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 PREPLQ4J6C6 727 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 FNDC3BQ53EP0 1204 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 SLC45A4Q5BKX6 768 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ZNF569Q5MCW4 686 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 EOGTQ5NDL2 527 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ATXN7L2Q5T6C5 722 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 PIP5KL1Q5T9C9 394 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 TMCO4Q5TGY1 634 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 AGBL4Q5VU57 503 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 PEAR1Q5VY43 1037 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 IL31Q6EBC2 164 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 TTC27Q6P3X3 843 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 DRICH1Q6PGQ1 229 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 NCEH1Q6PIU2 408 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 KDELC1Q6UW63 502 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 SERPINA13PQ6UXR4 307 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 PARS2Q7L3T8 475 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ZNF572Q7Z3I7 529 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 TRMT11Q7Z4G4 463 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 PRPF39Q86UA1 669 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 WDR5BQ86VZ2 330 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 CREG2Q8IUH2 290 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 LRRC49Q8IUZ0 686 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 CHPFQ8IZ52 775 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ZNF567Q8N184 647 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 STK40Q8N2I9 435 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 CBARPQ8N350 705 aaPredicted RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 TXLNBQ8N3L3 684 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 CAMKK1Q8N5S9 505 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 PCDH20Q8N6Y1 951 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 SUMF1Q8NBK3 374 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 KCTD6Q8NC69 237 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 OR2AP1Q8NGE2 309 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 OR2T3Q8NH03 318 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 CASKIN2Q8WXE0 1202 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ATG4AQ8WYN0 398 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 HAUS1Q96CS2 278 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 MS4A14Q96JA4 679 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 EXOC2Q96KP1 924 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 SMIM14Q96QK8 99 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 TRIB3Q96RU7 358 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 OSBPL9Q96SU4 736 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 FAM118BQ9BPY3 351 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 SPON2Q9BUD6 331 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 HEMGNQ9BXL5 484 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 CPEB1Q9BZB8 566 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 TM6SF2Q9BZW4 377 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 MFSD1Q9H3U5 465 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 C10orf88Q9H8K7 445 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 FBRSQ9HAH7 460 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 SSU72Q9NP77 194 aaKnown RBP3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 DNPEPQ9ULA0 475 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 JRKLQ9Y4A0 524 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 SLCO1B1Q9Y6L6 691 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ANKRD12Q6UB98 2062 aa3.83□□□□□ -1.8
SMARCE1-215ENST00000578995 ASXL3Q9C0F0 2248 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 RP1P56715 2156 aa3.82□□□□□ -1.8
SMARCE1-215ENST00000578995 PCNX2A6NKB5 2137 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms