RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 SEL1L3Q68CR1 1132 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 ARMCX6Q7L4S7 300 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 ZNF572Q7Z3I7 529 aaPredicted RBP12.39□□□□□ -0.43
RARA-208ENST00000577646 ABI3BPQ7Z7G0 1075 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 OXR1Q8N573 874 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 DEFB119Q8N690 84 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 IPMKQ8NFU5 416 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 BRSK1Q8TDC3 778 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 C16orf45Q96MC5 204 aaPredicted RBP12.39□□□□□ -0.43
RARA-208ENST00000577646 KLF6Q99612 283 aaPredicted RBP12.39□□□□□ -0.43
RARA-208ENST00000577646 TBL1YQ9BQ87 522 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 WRAP53Q9BUR4 548 aaKnown RBP12.39□□□□□ -0.43
RARA-208ENST00000577646 MIR1-1HGQ9H1L0 117 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 ERVMER34-1Q9H9K5 563 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 ZFYVE1Q9HBF4 777 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 ETNK1Q9HBU6 452 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 CAPN10Q9HC96 672 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 PARD6AQ9NPB6 346 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 RAB6BQ9NRW1 208 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 UBP1Q9NZI7 540 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 PKD2L2Q9NZM6 624 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 CDC23Q9UJX2 597 aa12.39□□□□□ -0.43
RARA-208ENST00000577646 C2orf81A6NN90 581 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 A6NNZ2 444 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 SMAPO00193 183 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 PDE2AO00408 941 aaPredicted RBP12.38□□□□□ -0.43
RARA-208ENST00000577646 SLC31A1O15431 190 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 RECQL5O94762 991 aaPredicted RBP12.38□□□□□ -0.43
RARA-208ENST00000577646 CRTAMO95727 393 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 KRT14P02533 472 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 MAT2AP31153 395 aaKnown RBP12.38□□□□□ -0.43
RARA-208ENST00000577646 MAGEA6P43360 314 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 KCNJ1P48048 391 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 LMAN1P49257 510 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 C21orf59P57076 290 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 DCDC1P59894 354 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 CDH17Q12864 832 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 PTK2BQ14289 1009 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 ACOX1Q15067 660 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 CDKN3Q16667 212 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 WHAMMP3Q1A5X7 153 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 PDPK2PQ6A1A2 396 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 KYAT3Q6YP21 454 aaKnown RBP12.38□□□□□ -0.43
RARA-208ENST00000577646 DGLUCYQ7Z3D6 616 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 MAATS1Q7Z4T9 603 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 TMC3Q7Z5M5 1100 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 TECPR1Q7Z6L1 1165 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 PCGF5Q86SE9 256 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 DTD2Q96FN9 168 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 KLHDC7BQ96G42 594 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 CAPZA3Q96KX2 299 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 GORASP1Q9BQQ3 440 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 GPR63Q9BZJ6 419 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 EBF2Q9HAK2 575 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 AASDHPPTQ9NRN7 309 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 TMEM74BQ9NUR3 256 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 GGT7Q9UJ14 662 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 ITM2BQ9Y287 266 aa12.38□□□□□ -0.43
RARA-208ENST00000577646 TNRC6BQ9UPQ9 1833 aaKnown RBP12.38□□□□□ -0.43
RARA-208ENST00000577646 SDK1Q7Z5N4 2213 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 C1orf232A0A0U1RR37 186 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 A0A1W2PR77 199 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 TLR4O00206 839 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 ARHGAP33O14559 1287 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 FANCGO15287 622 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 YKT6O15498 198 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 AGTP01019 485 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 ALPIP09923 528 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 TSHRP16473 764 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 CTPS1P17812 591 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 ITIH2P19823 946 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 TPSB2P20231 275 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 TGM1P22735 817 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 LHCGRP22888 699 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 KELP23276 732 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 MAOBP27338 520 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 TRIM23P36406 574 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 FGL2Q14314 439 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 GALNT3Q14435 633 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 TAF1AQ15573 450 aaPredicted RBP12.37□□□□□ -0.43
RARA-208ENST00000577646 TPSAB1Q15661 275 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 TRIM61Q5EBN2 209 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 LRRC73Q5JTD7 316 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 LRRC66Q68CR7 880 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 ESRP1Q6NXG1 681 aaKnown RBP12.37□□□□□ -0.43
RARA-208ENST00000577646 TTC27Q6P3X3 843 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 PRR23CQ6ZRP0 262 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 NLRP9Q7RTR0 991 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 ZCCHC9Q8N567 271 aaKnown RBP12.37□□□□□ -0.43
RARA-208ENST00000577646 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
RARA-208ENST00000577646 TP53I13Q8NBR0 393 aaPredicted RBP12.37□□□□□ -0.43
RARA-208ENST00000577646 MNS1Q8NEH6 495 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 SPATA4Q8NEY3 305 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 PEX13Q92968 403 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 PLEKHG4BQ96PX9 1271 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 FICDQ9BVA6 458 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 FRMD8Q9BZ67 464 aaPredicted RBP12.37□□□□□ -0.43
RARA-208ENST00000577646 NEU2Q9Y3R4 380 aa12.37□□□□□ -0.43
RARA-208ENST00000577646 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.37□□□□□ -0.43
RARA-208ENST00000577646 NUMA1Q14980 2115 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms