RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 KCTD5Q9NXV2 234 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 LCMT1Q9UIC8 334 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 PHTF1Q9UMS5 762 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 SATB2Q9UPW6 733 aa9.67□□□□□ -0.86
NPLOC4-212ENST00000573328 PRSS38A1L453 326 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 NPIPB15A6NHN6 443 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 PDE2AO00408 941 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 TCEA3O75764 348 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 HEXIM1O94992 359 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 PGLSO95336 258 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 PEX11BO96011 259 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 MYCLP1P12525 358 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 CR2P20023 1033 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 CA4P22748 312 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 RBMS1P29558 406 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 ETV3P41162 512 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 MESDQ14696 234 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 PDK2Q15119 407 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 IFI16Q16666 785 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 ANKRD20A8PQ5CZ79 823 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 PNCKQ6P2M8 343 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 LVRNQ6Q4G3 990 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 HEATR4Q86WZ0 1026 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 LRRC49Q8IUZ0 686 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 RNF214Q8ND24 703 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 CCNYQ8ND76 341 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 ZNF248Q8NDW4 579 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 FAM46DQ8NEK8 389 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 OR8K1Q8NGG5 319 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 CCDC74AQ96AQ1 378 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 DTD2Q96FN9 168 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 COQ10AQ96MF6 247 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 ZNF578Q96N58 590 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 GFM1Q96RP9 751 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 RBM15Q96T37 977 aaKnown RBP eCLIP9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 CARS2Q9HA77 564 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 FGF22Q9HCT0 170 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 THSD1Q9NS62 852 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 WDR70Q9NW82 654 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 RAI2Q9Y5P3 530 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 DGKBQ9Y6T7 804 aa9.66□□□□□ -0.86
NPLOC4-212ENST00000573328 SSU72P8A0A1W2PR75 194 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 LRRD1A4D1F6 860 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 PSMD11O00231 422 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 TNFRSF10CO14798 259 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 RPLP0P05388 317 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 TMEM253P0C7T8 217 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 HOXB3P14651 431 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 GM2AP17900 193 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 MX2P20592 715 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 LHCGRP22888 699 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 IL4RP24394 825 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 HNRNPH3P31942 346 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 GPR1P46091 355 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 LSSP48449 732 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 TAS2R40P59535 323 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 DSC2Q02487 901 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 GALNT2Q10471 571 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 BIRC2Q13490 618 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 PAFAH1B3Q15102 231 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 BROXQ5VW32 411 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 KCTD16Q68DU8 428 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 DOK6Q6PKX4 331 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 HSD11B1LQ7Z5J1 315 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 TSPAN33Q86UF1 283 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 PELI3Q8N2H9 469 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 Q8N9G6 341 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 OR6C4Q8NGE1 309 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 FAM71BQ8TC56 605 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 KIAA1524Q8TCG1 905 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 LRRN4Q8WUT4 740 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 GRAMD1AQ96CP6 724 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 CCDC42Q96M95 316 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 FCRL3Q96P31 734 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 DNAJC7Q99615 494 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 LGR4Q9BXB1 951 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 TMEM168Q9H0V1 697 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 DPEP2Q9H4A9 486 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 EPB41L5Q9HCM4 733 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 ABHD10Q9NUJ1 306 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 SPTLC3Q9NUV7 552 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 RBM22Q9NW64 420 aaKnown RBP eCLIP9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 CD84Q9UIB8 345 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 ENTPD2Q9Y5L3 495 aa9.65□□□□□ -0.86
NPLOC4-212ENST00000573328 PTPRQQ9UMZ3 2332 aa9.65□□□□□ -0.87
NPLOC4-212ENST00000573328 CCDC187A0A096LP49 1063 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 A0A0U1RQS6 177 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 D6RAR5 112 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 MATN3O15232 486 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 CASC3O15234 703 aaKnown RBP9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 MFAP3LO75121 409 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 KRT1P04264 644 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 HLA-DQB2P05538 268 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 PDHA1P08559 390 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 HOXC4P09017 264 aaPredicted RBP9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 TNNT1P13805 278 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 CCNB1P14635 433 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 KDELR1P24390 212 aa9.64□□□□□ -0.87
NPLOC4-212ENST00000573328 CCNCP24863 283 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms